Cargando…

QTL mapping and candidate gene analysis of low temperature germination in rice (Oryza sativa L.) using a genome wide association study

Low temperature germination (LTG) is a key agronomic trait in rice (Oryza sativa L.). However, the genetic basis of natural variation for LTG is largely unknown. Here, a genome-wide association study (GWAS) was performed using 276 accessions from the 3,000 Rice Genomes (3K-RG) project with 497 k sin...

Descripción completa

Detalles Bibliográficos
Autores principales:	Mao, Feng, Wu, Depeng, Lu, Fangfang, Yi, Xin, Gu, Yujuan, Liu, Bin, Liu, Fuxia, Tang, Tang, Shi, Jianxin, Zhao, Xiangxiang, Liu, Lei, Ji, Lilian
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	PeerJ Inc. 2022
Materias:	Agricultural Science
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9107303/ https://www.ncbi.nlm.nih.gov/pubmed/35578671 http://dx.doi.org/10.7717/peerj.13407

Ejemplares similares

The Candidate Genes Underlying a Stably Expressed QTL for Low Temperature Germinability in Rice (Oryza sativa L.)
por: Yang, Tifeng, et al.
Publicado: (2020)

Mapping QTLs for cold tolerance at germination and the early seedling stage in rice (Oryza sativa L.)
por: Ranawake, Aloka Lanka, et al.
Publicado: (2014)

Detrimental effects of heat stress on grain weight and quality in rice (Oryza sativa L.) are aggravated by decreased relative humidity
por: Yan, Haoliang, et al.
Publicado: (2021)

Dissection of three quantitative trait loci for grain size on the long arm of chromosome 10 in rice (Oryza sativa L.)
por: Zhu, Yu-Jun, et al.
Publicado: (2019)

Transcriptomic and proteomic profiles of II YOU 838 (Oryza sativa) provide insights into heat stress tolerance in hybrid rice
por: Wang, Yan, et al.
Publicado: (2020)

Effects of temperature frequency trends on projected japonica rice (Oryza sativa L.) yield and dry matter distribution with elevated carbon dioxide
por: Zhou, Zeyu, et al.
Publicado: (2021)

A Genome-Wide Association Study Reveals Candidate Genes Related to Salt Tolerance in Rice (Oryza sativa) at the Germination Stage
por: Yu, Jie, et al.
Publicado: (2018)

Candidate gene discovery for salt tolerance in rice (Oryza sativa L.) at the germination stage based on genome-wide association study
por: Ju, Chunyan, et al.
Publicado: (2022)

A review of starch biosynthesis in cereal crops and its potential breeding applications in rice (Oryza Sativa L.)
por: Li, Ruiqing, et al.
Publicado: (2021)

Genetic diversity in Oryza glumaepatula wild rice populations in Costa Rica and possible gene flow from O. sativa
por: Fuchs, Eric J., et al.
Publicado: (2016)

Fine-mapping of qTGW2, a quantitative trait locus for grain weight in rice (Oryza sativa L.)
por: Zhang, Hui, et al.
Publicado: (2020)

Amendments to saline-sodic soils showed long-term effects on improving growth and yield of rice (Oryza sativa L.)
por: Zhao, Dandan, et al.
Publicado: (2020)

Genome-wide identification of DUF506 gene family in Oryza sativa and expression profiling under abiotic stresses
por: Dong, Wei, et al.
Publicado: (2023)

Integration of QTL Mapping and Whole Genome Sequencing Identifies Candidate Genes for Alkalinity Tolerance in Rice (Oryza sativa)
por: Singh, Lovepreet, et al.
Publicado: (2022)

Evaluation and characterization of indigenous rice (Oryza sativa L.) landraces resistant to brown planthopper Nilaparvata lugens (Stål.) biotype 4
por: Roy, Debashis, et al.
Publicado: (2022)

Quantitative trait loci associated with straighthead-resistance used for marker assisted selection in rice (Oryza sativa L.) RIL populations
por: Pan, Xuhao, et al.
Publicado: (2023)

QTL mapping and identification of candidate genes using a genome-wide association study for heat tolerance at anthesis in rice (Oryza sativa L.)
por: Hu, Changmin, et al.
Publicado: (2022)

Identification and validation of a novel major QTL for harvest index in rice (Oryza sativa L.)
por: Zhang, Shaohong, et al.
Publicado: (2017)

Comparative transcriptome analysis of panicle development under heat stress in two rice (Oryza sativa L.) cultivars differing in heat tolerance
por: Wang, Yaliang, et al.
Publicado: (2019)

Serine carboxypeptidase 46 Regulates Grain Filling and Seed Germination in Rice (Oryza sativa L.)
por: Li, Zhiyong, et al.
Publicado: (2016)

Identification of a Major QTL and Candidate Gene Analysis of Salt Tolerance at the Bud Burst Stage in Rice (Oryza sativa L.) Using QTL-Seq and RNA-Seq
por: Lei, Lei, et al.
Publicado: (2020)

Genome-wide association study uncovers new genetic loci and candidate genes underlying seed chilling-germination in maize
por: Zhang, Yinchao, et al.
Publicado: (2021)

Mapping the N-linked glycosites of rice (Oryza sativa L.) germinating embryos
por: Ying, Jiezheng, et al.
Publicado: (2017)

OsABF1 Represses Gibberellin Biosynthesis to Regulate Plant Height and Seed Germination in Rice (Oryza sativa L.)
por: Tang, Liqun, et al.
Publicado: (2021)

Genome wide association analysis of cold tolerance at germination in temperate japonica rice (Oryza sativa L.) varieties
por: Sales, Ester, et al.
Publicado: (2017)

The rice XA21 ectodomain fused to the Arabidopsis EFR cytoplasmic domain confers resistance to Xanthomonas oryzae pv. oryzae
por: Thomas, Nicholas C., et al.
Publicado: (2018)

Impact of fertilization with reducing in nitrogen and phosphorous application on growth, yield and biomass accumulation of rice (Oryza sativa L.) under a dual cropping system
por: Wu, Ke, et al.
Publicado: (2021)

Genetic Architecture of Aluminum Tolerance in Rice (Oryza sativa) Determined through Genome-Wide Association Analysis and QTL Mapping
por: Famoso, Adam N., et al.
Publicado: (2011)

Fine Mapping Identifies a New QTL for Brown Rice Rate in Rice (Oryza Sativa L.)
por: Ren, Deyong, et al.
Publicado: (2016)

QTL Mapping and Candidate Gene Analysis for Seed Germination Response to Low Temperature in Rice
por: Kim, Nari, et al.
Publicado: (2022)

Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits
por: Panda, Debabrata, et al.
Publicado: (2019)

Genome-Wide Association Study Reveals a Genetic Mechanism of Salt Tolerance Germinability in Rice (Oryza sativa L.)
por: Li, Caijing, et al.
Publicado: (2022)

Analysis of QTL mapping for germination and seedling response to drought stress in sunflower (Helianthus annuus L.)
por: Shi, Huimin, et al.
Publicado: (2023)

Conservation tillage and fertiliser management strategies impact on basmati rice (Oryza sativa L): crop performance, crop water productivity, nutrient uptake and fertility status of the soil under rice-wheat cropping system
por: Chandra, Mandapelli Sharath, et al.
Publicado: (2023)

Classifying Oryza sativa accessions into Indica and Japonica using logistic regression model with phenotypic data
por: Kim, Bongsong
Publicado: (2019)

Mechanism of delayed seed germination caused by high temperature during grain filling in rice (Oryza sativa L.)
por: Suriyasak, Chetphilin, et al.
Publicado: (2020)

Whole genome sequencing data of Oryza sativa L. cv. Takanari
por: Kajiya-Kanegae, Hiromi, et al.
Publicado: (2019)

Effects of extraction methods on protein properties obtained from paddy rice and germinated paddy rice
por: Likittrakulwong, Wirot, et al.
Publicado: (2021)

Protein profile of rice (Oryza sativa) seeds
por: Yang, Yanhua, et al.
Publicado: (2013)

Seed Germination Ecology of Echinochloa glabrescens and Its Implication for Management in Rice (Oryza sativa L.)
por: Opeña, Jhoana L., et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_sqcntsnks60htmk770v1tjkagh