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Machine Learning-Based Radiomics for Prediction of Epidermal Growth Factor Receptor Mutations in Lung Adenocarcinoma

Identifying an epidermal growth factor receptor (EGFR) mutation is important because EGFR tyrosine kinase inhibitors are the first-line treatment of choice for patients with EGFR mutation-positive lung adenocarcinomas (LUAC). This study is aimed at developing and validating a radiomics-based machine...

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Autores principales: Lu, Jiameng, Ji, Xiaoqing, Wang, Lixia, Jiang, Yunxiu, Liu, Xinyi, Ma, Zhenshen, Ning, Yafei, Dong, Jie, Peng, Haiying, Sun, Fei, Guo, Zihan, Ji, Yanbo, Xing, Jianping, Lu, Yue, Lu, Degan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9107363/
https://www.ncbi.nlm.nih.gov/pubmed/35578691
http://dx.doi.org/10.1155/2022/2056837
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author Lu, Jiameng
Ji, Xiaoqing
Wang, Lixia
Jiang, Yunxiu
Liu, Xinyi
Ma, Zhenshen
Ning, Yafei
Dong, Jie
Peng, Haiying
Sun, Fei
Guo, Zihan
Ji, Yanbo
Xing, Jianping
Lu, Yue
Lu, Degan
author_facet Lu, Jiameng
Ji, Xiaoqing
Wang, Lixia
Jiang, Yunxiu
Liu, Xinyi
Ma, Zhenshen
Ning, Yafei
Dong, Jie
Peng, Haiying
Sun, Fei
Guo, Zihan
Ji, Yanbo
Xing, Jianping
Lu, Yue
Lu, Degan
author_sort Lu, Jiameng
collection PubMed
description Identifying an epidermal growth factor receptor (EGFR) mutation is important because EGFR tyrosine kinase inhibitors are the first-line treatment of choice for patients with EGFR mutation-positive lung adenocarcinomas (LUAC). This study is aimed at developing and validating a radiomics-based machine learning (ML) approach to identify EGFR mutations in patients with LUAC. We retrospectively collected data from 201 patients with positive EGFR mutation LUAC (140 in the training cohort and 61 in the validation cohort). We extracted 1316 radiomics features from preprocessed CT images and selected 14 radiomics features and 1 clinical feature which were most relevant to mutations through filter method. Subsequently, we built models using 7 ML approaches and established the receiver operating characteristic (ROC) curve to assess the discriminating performance of these models. In terms of predicting EGFR mutation, the model derived from radiomics features and combined models (radiomics features and relevant clinical factors) had an AUC of 0.79 (95% confidence interval (CI): 0.77-0.82), 0.86 (0.87-0.88), respectively. Our study offers a radiomics-based ML model using filter methods to detect the EGFR mutation in patients with LUAC. This convenient and low-cost method may be of help to noninvasively identify patients before obtaining tumor sample for molecule testing.
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spelling pubmed-91073632022-05-15 Machine Learning-Based Radiomics for Prediction of Epidermal Growth Factor Receptor Mutations in Lung Adenocarcinoma Lu, Jiameng Ji, Xiaoqing Wang, Lixia Jiang, Yunxiu Liu, Xinyi Ma, Zhenshen Ning, Yafei Dong, Jie Peng, Haiying Sun, Fei Guo, Zihan Ji, Yanbo Xing, Jianping Lu, Yue Lu, Degan Dis Markers Research Article Identifying an epidermal growth factor receptor (EGFR) mutation is important because EGFR tyrosine kinase inhibitors are the first-line treatment of choice for patients with EGFR mutation-positive lung adenocarcinomas (LUAC). This study is aimed at developing and validating a radiomics-based machine learning (ML) approach to identify EGFR mutations in patients with LUAC. We retrospectively collected data from 201 patients with positive EGFR mutation LUAC (140 in the training cohort and 61 in the validation cohort). We extracted 1316 radiomics features from preprocessed CT images and selected 14 radiomics features and 1 clinical feature which were most relevant to mutations through filter method. Subsequently, we built models using 7 ML approaches and established the receiver operating characteristic (ROC) curve to assess the discriminating performance of these models. In terms of predicting EGFR mutation, the model derived from radiomics features and combined models (radiomics features and relevant clinical factors) had an AUC of 0.79 (95% confidence interval (CI): 0.77-0.82), 0.86 (0.87-0.88), respectively. Our study offers a radiomics-based ML model using filter methods to detect the EGFR mutation in patients with LUAC. This convenient and low-cost method may be of help to noninvasively identify patients before obtaining tumor sample for molecule testing. Hindawi 2022-05-07 /pmc/articles/PMC9107363/ /pubmed/35578691 http://dx.doi.org/10.1155/2022/2056837 Text en Copyright © 2022 Jiameng Lu et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Lu, Jiameng
Ji, Xiaoqing
Wang, Lixia
Jiang, Yunxiu
Liu, Xinyi
Ma, Zhenshen
Ning, Yafei
Dong, Jie
Peng, Haiying
Sun, Fei
Guo, Zihan
Ji, Yanbo
Xing, Jianping
Lu, Yue
Lu, Degan
Machine Learning-Based Radiomics for Prediction of Epidermal Growth Factor Receptor Mutations in Lung Adenocarcinoma
title Machine Learning-Based Radiomics for Prediction of Epidermal Growth Factor Receptor Mutations in Lung Adenocarcinoma
title_full Machine Learning-Based Radiomics for Prediction of Epidermal Growth Factor Receptor Mutations in Lung Adenocarcinoma
title_fullStr Machine Learning-Based Radiomics for Prediction of Epidermal Growth Factor Receptor Mutations in Lung Adenocarcinoma
title_full_unstemmed Machine Learning-Based Radiomics for Prediction of Epidermal Growth Factor Receptor Mutations in Lung Adenocarcinoma
title_short Machine Learning-Based Radiomics for Prediction of Epidermal Growth Factor Receptor Mutations in Lung Adenocarcinoma
title_sort machine learning-based radiomics for prediction of epidermal growth factor receptor mutations in lung adenocarcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9107363/
https://www.ncbi.nlm.nih.gov/pubmed/35578691
http://dx.doi.org/10.1155/2022/2056837
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