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Pan-Cancer Analyses Reveal Oncogenic and Immunological Role of PLOD2
Some previous studies have shown that PLOD2 has some value in tumorigenesis. However, the broad significance of PLOD2 has not been discussed in depth. This study was aimed at elaborated and summarized the value of PLOD2 in various tumors. First, we integrated GTEx, The Cancer Genome Atlas and Cancer...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9108334/ https://www.ncbi.nlm.nih.gov/pubmed/35586565 http://dx.doi.org/10.3389/fgene.2022.864655 |
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author | Xu, Qiqi Kong, Na Zhao, Yiguo Wu, Quan Wang, Xin Xun, Xiaodong Gao, Pengji |
author_facet | Xu, Qiqi Kong, Na Zhao, Yiguo Wu, Quan Wang, Xin Xun, Xiaodong Gao, Pengji |
author_sort | Xu, Qiqi |
collection | PubMed |
description | Some previous studies have shown that PLOD2 has some value in tumorigenesis. However, the broad significance of PLOD2 has not been discussed in depth. This study was aimed at elaborated and summarized the value of PLOD2 in various tumors. First, we integrated GTEx, The Cancer Genome Atlas and Cancer Cell Line Encyclopedia databases to analyze the expression of PLOD2, and found that it was expressed differently in normal tissues and significantly highly expressed in most tumors compared with normal tissues. Second, our analysis revealed that PLOD2 expression was negatively correlated with the prognosis of several tumors. For gastric cancer, the median overall survival time was significantly higher in the PLOD2 low expression group [HR 0.616 (95%CI 0.442–0.858), p = 0.004]. Third, for tumor immunity, PLOD2 was significantly associated with tumor infiltration, including immune infiltrating cells; immune checkpoint expression; immune microenvironment scores (immune score, stromal score and estimate scores); immunotherapy-related scores (tumor mutational burden, microsatellite instability, tumor neoantigen burden); expression of DNA repair genes Mismatch Repairs and methyltransferase; and enrichment analyses identified PLOD2-associated terms and pathways. Lastly, twenty pairs of gastric cancer and adjacent immunohistochemistry showed that PLOD2 was significantly overexpressed in gastric cancer (p < 0.001). Collectively, PLOD2 played a significant role in tumorigenesis and maybe serve as a potential biomarker for diagnosis and prognosis in cancers. |
format | Online Article Text |
id | pubmed-9108334 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91083342022-05-17 Pan-Cancer Analyses Reveal Oncogenic and Immunological Role of PLOD2 Xu, Qiqi Kong, Na Zhao, Yiguo Wu, Quan Wang, Xin Xun, Xiaodong Gao, Pengji Front Genet Genetics Some previous studies have shown that PLOD2 has some value in tumorigenesis. However, the broad significance of PLOD2 has not been discussed in depth. This study was aimed at elaborated and summarized the value of PLOD2 in various tumors. First, we integrated GTEx, The Cancer Genome Atlas and Cancer Cell Line Encyclopedia databases to analyze the expression of PLOD2, and found that it was expressed differently in normal tissues and significantly highly expressed in most tumors compared with normal tissues. Second, our analysis revealed that PLOD2 expression was negatively correlated with the prognosis of several tumors. For gastric cancer, the median overall survival time was significantly higher in the PLOD2 low expression group [HR 0.616 (95%CI 0.442–0.858), p = 0.004]. Third, for tumor immunity, PLOD2 was significantly associated with tumor infiltration, including immune infiltrating cells; immune checkpoint expression; immune microenvironment scores (immune score, stromal score and estimate scores); immunotherapy-related scores (tumor mutational burden, microsatellite instability, tumor neoantigen burden); expression of DNA repair genes Mismatch Repairs and methyltransferase; and enrichment analyses identified PLOD2-associated terms and pathways. Lastly, twenty pairs of gastric cancer and adjacent immunohistochemistry showed that PLOD2 was significantly overexpressed in gastric cancer (p < 0.001). Collectively, PLOD2 played a significant role in tumorigenesis and maybe serve as a potential biomarker for diagnosis and prognosis in cancers. Frontiers Media S.A. 2022-05-02 /pmc/articles/PMC9108334/ /pubmed/35586565 http://dx.doi.org/10.3389/fgene.2022.864655 Text en Copyright © 2022 Xu, Kong, Zhao, Wu, Wang, Xun and Gao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Xu, Qiqi Kong, Na Zhao, Yiguo Wu, Quan Wang, Xin Xun, Xiaodong Gao, Pengji Pan-Cancer Analyses Reveal Oncogenic and Immunological Role of PLOD2 |
title | Pan-Cancer Analyses Reveal Oncogenic and Immunological Role of PLOD2 |
title_full | Pan-Cancer Analyses Reveal Oncogenic and Immunological Role of PLOD2 |
title_fullStr | Pan-Cancer Analyses Reveal Oncogenic and Immunological Role of PLOD2 |
title_full_unstemmed | Pan-Cancer Analyses Reveal Oncogenic and Immunological Role of PLOD2 |
title_short | Pan-Cancer Analyses Reveal Oncogenic and Immunological Role of PLOD2 |
title_sort | pan-cancer analyses reveal oncogenic and immunological role of plod2 |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9108334/ https://www.ncbi.nlm.nih.gov/pubmed/35586565 http://dx.doi.org/10.3389/fgene.2022.864655 |
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