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Genomic Landscape of Actionable Mutations in Primary and Metastatic Tissues of Colon Adenocarcinoma
Aim To assess the actionable genomic landscape of colon adenocarcinoma in the primary and metastatic tumor tissues. Methods The data from the American Association for Cancer Research (AACR) Project Genomics Evidence Neoplasia Information Exchange (GENIE) were used in this study. Colon adenocarcinoma...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cureus
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9110093/ https://www.ncbi.nlm.nih.gov/pubmed/35592200 http://dx.doi.org/10.7759/cureus.24175 |
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author | Yekedüz, Emre Akbulut, Hakan Utkan, Güngör Ürün, Yüksel |
author_facet | Yekedüz, Emre Akbulut, Hakan Utkan, Güngör Ürün, Yüksel |
author_sort | Yekedüz, Emre |
collection | PubMed |
description | Aim To assess the actionable genomic landscape of colon adenocarcinoma in the primary and metastatic tumor tissues. Methods The data from the American Association for Cancer Research (AACR) Project Genomics Evidence Neoplasia Information Exchange (GENIE) were used in this study. Colon adenocarcinoma patients with primary and metastatic tissue samples (distant organ and lymph node) were selected. Patients with samples from a local recurrence, not otherwise specified tumor samples, and data not collected for sampling localization were excluded. Results A total of 3286 and 1727 patients were included in the primary and metastatic tissue sample groups, respectively. There was no difference between the groups in Kirsten rat sarcoma viral oncogene homolog (KRAS) mutation rates. The rates of v-Raf murine sarcoma viral oncogene homolog B (BRAF) and mismatch repair (MMR) gene mutations were higher in the primary tumor tissues than in the metastatic tumor tissues. There was also no difference between the groups in other actionable gene alterations (e.g. ERBB2 amplification and neurotrophic receptor tyrosine kinase (NTRK) 1 and NTRK3 fusions). In contrast to all cohorts, in Asian and black patients, there was no difference in actionable genomic landscape between the primary and metastatic tumor tissues. Conclusion This study had the largest number of colon cancer patients that evaluated the actionable genomic alterations in primary and metastatic tumor tissues. BRAF and MMR gene alterations were more frequent in the primary tumor tissues than the metastatic tumor tissues. |
format | Online Article Text |
id | pubmed-9110093 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Cureus |
record_format | MEDLINE/PubMed |
spelling | pubmed-91100932022-05-18 Genomic Landscape of Actionable Mutations in Primary and Metastatic Tissues of Colon Adenocarcinoma Yekedüz, Emre Akbulut, Hakan Utkan, Güngör Ürün, Yüksel Cureus Oncology Aim To assess the actionable genomic landscape of colon adenocarcinoma in the primary and metastatic tumor tissues. Methods The data from the American Association for Cancer Research (AACR) Project Genomics Evidence Neoplasia Information Exchange (GENIE) were used in this study. Colon adenocarcinoma patients with primary and metastatic tissue samples (distant organ and lymph node) were selected. Patients with samples from a local recurrence, not otherwise specified tumor samples, and data not collected for sampling localization were excluded. Results A total of 3286 and 1727 patients were included in the primary and metastatic tissue sample groups, respectively. There was no difference between the groups in Kirsten rat sarcoma viral oncogene homolog (KRAS) mutation rates. The rates of v-Raf murine sarcoma viral oncogene homolog B (BRAF) and mismatch repair (MMR) gene mutations were higher in the primary tumor tissues than in the metastatic tumor tissues. There was also no difference between the groups in other actionable gene alterations (e.g. ERBB2 amplification and neurotrophic receptor tyrosine kinase (NTRK) 1 and NTRK3 fusions). In contrast to all cohorts, in Asian and black patients, there was no difference in actionable genomic landscape between the primary and metastatic tumor tissues. Conclusion This study had the largest number of colon cancer patients that evaluated the actionable genomic alterations in primary and metastatic tumor tissues. BRAF and MMR gene alterations were more frequent in the primary tumor tissues than the metastatic tumor tissues. Cureus 2022-04-16 /pmc/articles/PMC9110093/ /pubmed/35592200 http://dx.doi.org/10.7759/cureus.24175 Text en Copyright © 2022, Yekedüz et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Oncology Yekedüz, Emre Akbulut, Hakan Utkan, Güngör Ürün, Yüksel Genomic Landscape of Actionable Mutations in Primary and Metastatic Tissues of Colon Adenocarcinoma |
title | Genomic Landscape of Actionable Mutations in Primary and Metastatic Tissues of Colon Adenocarcinoma |
title_full | Genomic Landscape of Actionable Mutations in Primary and Metastatic Tissues of Colon Adenocarcinoma |
title_fullStr | Genomic Landscape of Actionable Mutations in Primary and Metastatic Tissues of Colon Adenocarcinoma |
title_full_unstemmed | Genomic Landscape of Actionable Mutations in Primary and Metastatic Tissues of Colon Adenocarcinoma |
title_short | Genomic Landscape of Actionable Mutations in Primary and Metastatic Tissues of Colon Adenocarcinoma |
title_sort | genomic landscape of actionable mutations in primary and metastatic tissues of colon adenocarcinoma |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9110093/ https://www.ncbi.nlm.nih.gov/pubmed/35592200 http://dx.doi.org/10.7759/cureus.24175 |
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