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T-cell epitope-based vaccine prediction against Aspergillus fumigatus: a harmful causative agent of aspergillosis
BACKGROUND: Among the most common causes of invasive aspergillosis and acute bronchopulmonary aspergillosis is Aspergillus fumigatus. Transmission with A. fumigatus produces aggressive aspergillosis in allogeneic haematopoietic stem cell transplant recipients, HIV patients, and cancer patients. Asth...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer Berlin Heidelberg
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9110580/ https://www.ncbi.nlm.nih.gov/pubmed/35575941 http://dx.doi.org/10.1186/s43141-022-00364-x |
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author | Jabin, Darakshan Kumar, Ajay |
author_facet | Jabin, Darakshan Kumar, Ajay |
author_sort | Jabin, Darakshan |
collection | PubMed |
description | BACKGROUND: Among the most common causes of invasive aspergillosis and acute bronchopulmonary aspergillosis is Aspergillus fumigatus. Transmission with A. fumigatus produces aggressive aspergillosis in allogeneic haematopoietic stem cell transplant recipients, HIV patients, and cancer patients. Asthmatics and cystic fibrosis patients are allergic to A. fumigatus. MHC class-II binding epitopes can initiate immunogenic responses in patients. In this study, we deployed immunoinformatic study to reveal epitopes from fungal proteins. RESULTS: In modern research, we found multiple epitopes ITLKLLHRYSYKLAG, KLVLRAFPNHFRGDS, RYSYKLAGVNQVDVV, GKSFELNQAARAVTQ, and LHRYSYKLAGVNQVD from crucial proteins of A. fumigatus 5,8-linoleate diol synthase (ACO55067.2) and ChainB-chitinase A1 (2XVN_B). RYSYKLAGVNQVDVV, GKSFELNQAARAVTQ, and LHRYSYKLAGVNQVD epitopes interact with HLA-DRB01_0101, while ITLKLLHRYSYKLAG and KLVLRAFPNHFRGDS epitopes interact with HLA-DRB01_1501. Molecular docking analysis reveals atomic contact energy (ACE) value for these five epitopes shown below −5 Kcal/mol in docked state. CONCLUSIONS: The invasive aspergillosis and acute bronchopulmonary aspergillosis are caused by harmful fungal pathogen Aspergillus fumigatus. Our modern immunoinformatic research shows ITLKLLHRYSYKLAG, KLVLRAFPNHFRGDS, RYSYKLAGVNQVDVV, GKSFELNQAARAVTQ, and LHRYSYKLAGVNQVD epitopes could bind to MHC-II HLA allelic determinants and can initiate immunogenic response in patients affected by Aspergillus fumigatus. |
format | Online Article Text |
id | pubmed-9110580 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-91105802022-06-04 T-cell epitope-based vaccine prediction against Aspergillus fumigatus: a harmful causative agent of aspergillosis Jabin, Darakshan Kumar, Ajay J Genet Eng Biotechnol Research BACKGROUND: Among the most common causes of invasive aspergillosis and acute bronchopulmonary aspergillosis is Aspergillus fumigatus. Transmission with A. fumigatus produces aggressive aspergillosis in allogeneic haematopoietic stem cell transplant recipients, HIV patients, and cancer patients. Asthmatics and cystic fibrosis patients are allergic to A. fumigatus. MHC class-II binding epitopes can initiate immunogenic responses in patients. In this study, we deployed immunoinformatic study to reveal epitopes from fungal proteins. RESULTS: In modern research, we found multiple epitopes ITLKLLHRYSYKLAG, KLVLRAFPNHFRGDS, RYSYKLAGVNQVDVV, GKSFELNQAARAVTQ, and LHRYSYKLAGVNQVD from crucial proteins of A. fumigatus 5,8-linoleate diol synthase (ACO55067.2) and ChainB-chitinase A1 (2XVN_B). RYSYKLAGVNQVDVV, GKSFELNQAARAVTQ, and LHRYSYKLAGVNQVD epitopes interact with HLA-DRB01_0101, while ITLKLLHRYSYKLAG and KLVLRAFPNHFRGDS epitopes interact with HLA-DRB01_1501. Molecular docking analysis reveals atomic contact energy (ACE) value for these five epitopes shown below −5 Kcal/mol in docked state. CONCLUSIONS: The invasive aspergillosis and acute bronchopulmonary aspergillosis are caused by harmful fungal pathogen Aspergillus fumigatus. Our modern immunoinformatic research shows ITLKLLHRYSYKLAG, KLVLRAFPNHFRGDS, RYSYKLAGVNQVDVV, GKSFELNQAARAVTQ, and LHRYSYKLAGVNQVD epitopes could bind to MHC-II HLA allelic determinants and can initiate immunogenic response in patients affected by Aspergillus fumigatus. Springer Berlin Heidelberg 2022-05-16 /pmc/articles/PMC9110580/ /pubmed/35575941 http://dx.doi.org/10.1186/s43141-022-00364-x Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Jabin, Darakshan Kumar, Ajay T-cell epitope-based vaccine prediction against Aspergillus fumigatus: a harmful causative agent of aspergillosis |
title | T-cell epitope-based vaccine prediction against Aspergillus fumigatus: a harmful causative agent of aspergillosis |
title_full | T-cell epitope-based vaccine prediction against Aspergillus fumigatus: a harmful causative agent of aspergillosis |
title_fullStr | T-cell epitope-based vaccine prediction against Aspergillus fumigatus: a harmful causative agent of aspergillosis |
title_full_unstemmed | T-cell epitope-based vaccine prediction against Aspergillus fumigatus: a harmful causative agent of aspergillosis |
title_short | T-cell epitope-based vaccine prediction against Aspergillus fumigatus: a harmful causative agent of aspergillosis |
title_sort | t-cell epitope-based vaccine prediction against aspergillus fumigatus: a harmful causative agent of aspergillosis |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9110580/ https://www.ncbi.nlm.nih.gov/pubmed/35575941 http://dx.doi.org/10.1186/s43141-022-00364-x |
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