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Machine Learning Methods for Predicting Long-Term Mortality in Patients After Cardiac Surgery
OBJECTIVE: This study aims to construct and validate several machine learning (ML) algorithms to predict long-term mortality and identify risk factors in unselected patients post-cardiac surgery. METHODS: The Medical Information Mart for Intensive Care (MIMIC-III) database was used to perform a retr...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9110683/ https://www.ncbi.nlm.nih.gov/pubmed/35592400 http://dx.doi.org/10.3389/fcvm.2022.831390 |
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author | Yu, Yue Peng, Chi Zhang, Zhiyuan Shen, Kejia Zhang, Yufeng Xiao, Jian Xi, Wang Wang, Pei Rao, Jin Jin, Zhichao Wang, Zhinong |
author_facet | Yu, Yue Peng, Chi Zhang, Zhiyuan Shen, Kejia Zhang, Yufeng Xiao, Jian Xi, Wang Wang, Pei Rao, Jin Jin, Zhichao Wang, Zhinong |
author_sort | Yu, Yue |
collection | PubMed |
description | OBJECTIVE: This study aims to construct and validate several machine learning (ML) algorithms to predict long-term mortality and identify risk factors in unselected patients post-cardiac surgery. METHODS: The Medical Information Mart for Intensive Care (MIMIC-III) database was used to perform a retrospective administrative database study. Candidate predictors consisted of the demographics, comorbidity, vital signs, laboratory test results, scoring systems, and treatment information on the first day of ICU admission. Four-year mortality was set as the study outcome. We used the ML methods of logistic regression (LR), artificial neural network (NNET), naïve bayes (NB), gradient boosting machine (GBM), adapting boosting (Ada), random forest (RF), bagged trees (BT), and eXtreme Gradient Boosting (XGB). The prognostic capacity and clinical utility of these ML models were compared using the area under the receiver operating characteristic curves (AUC), calibration curves, and decision curve analysis (DCA). RESULTS: Of 7,368 patients in MIMIC-III included in the final cohort, a total of 1,337 (18.15%) patients died during a 4-year follow-up. Among 65 variables extracted from the database, a total of 25 predictors were selected using recursive feature elimination and included in the subsequent analysis. The Ada model performed best among eight models in both discriminatory ability with the highest AUC of 0.801 and goodness of fit (visualized by calibration curve). Moreover, the DCA shows that the net benefit of the RF, Ada, and BT models surpassed that of other ML models for almost all threshold probability values. Additionally, through the Ada technique, we determined that red blood cell distribution width (RDW), blood urea nitrogen (BUN), SAPS II, anion gap (AG), age, urine output, chloride, creatinine, congestive heart failure, and SOFA were the Top 10 predictors in the feature importance rankings. CONCLUSIONS: The Ada model performs best in predicting 4-year mortality after cardiac surgery among the eight ML models, which might have significant application in the development of early warning systems for patients following operations. |
format | Online Article Text |
id | pubmed-9110683 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91106832022-05-18 Machine Learning Methods for Predicting Long-Term Mortality in Patients After Cardiac Surgery Yu, Yue Peng, Chi Zhang, Zhiyuan Shen, Kejia Zhang, Yufeng Xiao, Jian Xi, Wang Wang, Pei Rao, Jin Jin, Zhichao Wang, Zhinong Front Cardiovasc Med Cardiovascular Medicine OBJECTIVE: This study aims to construct and validate several machine learning (ML) algorithms to predict long-term mortality and identify risk factors in unselected patients post-cardiac surgery. METHODS: The Medical Information Mart for Intensive Care (MIMIC-III) database was used to perform a retrospective administrative database study. Candidate predictors consisted of the demographics, comorbidity, vital signs, laboratory test results, scoring systems, and treatment information on the first day of ICU admission. Four-year mortality was set as the study outcome. We used the ML methods of logistic regression (LR), artificial neural network (NNET), naïve bayes (NB), gradient boosting machine (GBM), adapting boosting (Ada), random forest (RF), bagged trees (BT), and eXtreme Gradient Boosting (XGB). The prognostic capacity and clinical utility of these ML models were compared using the area under the receiver operating characteristic curves (AUC), calibration curves, and decision curve analysis (DCA). RESULTS: Of 7,368 patients in MIMIC-III included in the final cohort, a total of 1,337 (18.15%) patients died during a 4-year follow-up. Among 65 variables extracted from the database, a total of 25 predictors were selected using recursive feature elimination and included in the subsequent analysis. The Ada model performed best among eight models in both discriminatory ability with the highest AUC of 0.801 and goodness of fit (visualized by calibration curve). Moreover, the DCA shows that the net benefit of the RF, Ada, and BT models surpassed that of other ML models for almost all threshold probability values. Additionally, through the Ada technique, we determined that red blood cell distribution width (RDW), blood urea nitrogen (BUN), SAPS II, anion gap (AG), age, urine output, chloride, creatinine, congestive heart failure, and SOFA were the Top 10 predictors in the feature importance rankings. CONCLUSIONS: The Ada model performs best in predicting 4-year mortality after cardiac surgery among the eight ML models, which might have significant application in the development of early warning systems for patients following operations. Frontiers Media S.A. 2022-05-03 /pmc/articles/PMC9110683/ /pubmed/35592400 http://dx.doi.org/10.3389/fcvm.2022.831390 Text en Copyright © 2022 Yu, Peng, Zhang, Shen, Zhang, Xiao, Xi, Wang, Rao, Jin and Wang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cardiovascular Medicine Yu, Yue Peng, Chi Zhang, Zhiyuan Shen, Kejia Zhang, Yufeng Xiao, Jian Xi, Wang Wang, Pei Rao, Jin Jin, Zhichao Wang, Zhinong Machine Learning Methods for Predicting Long-Term Mortality in Patients After Cardiac Surgery |
title | Machine Learning Methods for Predicting Long-Term Mortality in Patients After Cardiac Surgery |
title_full | Machine Learning Methods for Predicting Long-Term Mortality in Patients After Cardiac Surgery |
title_fullStr | Machine Learning Methods for Predicting Long-Term Mortality in Patients After Cardiac Surgery |
title_full_unstemmed | Machine Learning Methods for Predicting Long-Term Mortality in Patients After Cardiac Surgery |
title_short | Machine Learning Methods for Predicting Long-Term Mortality in Patients After Cardiac Surgery |
title_sort | machine learning methods for predicting long-term mortality in patients after cardiac surgery |
topic | Cardiovascular Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9110683/ https://www.ncbi.nlm.nih.gov/pubmed/35592400 http://dx.doi.org/10.3389/fcvm.2022.831390 |
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