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Individualizing deep dynamic models for psychological resilience data
Deep learning approaches can uncover complex patterns in data. In particular, variational autoencoders achieve this by a non-linear mapping of data into a low-dimensional latent space. Motivated by an application to psychological resilience in the Mainz Resilience Project, which features intermitten...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9110739/ https://www.ncbi.nlm.nih.gov/pubmed/35577829 http://dx.doi.org/10.1038/s41598-022-11650-6 |
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author | Köber, Göran Pooseh, Shakoor Engen, Haakon Chmitorz, Andrea Kampa, Miriam Schick, Anita Sebastian, Alexandra Tüscher, Oliver Wessa, Michèle Yuen, Kenneth S. L. Walter, Henrik Kalisch, Raffael Timmer, Jens Binder, Harald |
author_facet | Köber, Göran Pooseh, Shakoor Engen, Haakon Chmitorz, Andrea Kampa, Miriam Schick, Anita Sebastian, Alexandra Tüscher, Oliver Wessa, Michèle Yuen, Kenneth S. L. Walter, Henrik Kalisch, Raffael Timmer, Jens Binder, Harald |
author_sort | Köber, Göran |
collection | PubMed |
description | Deep learning approaches can uncover complex patterns in data. In particular, variational autoencoders achieve this by a non-linear mapping of data into a low-dimensional latent space. Motivated by an application to psychological resilience in the Mainz Resilience Project, which features intermittent longitudinal measurements of stressors and mental health, we propose an approach for individualized, dynamic modeling in this latent space. Specifically, we utilize ordinary differential equations (ODEs) and develop a novel technique for obtaining person-specific ODE parameters even in settings with a rather small number of individuals and observations, incomplete data, and a differing number of observations per individual. This technique allows us to subsequently investigate individual reactions to stimuli, such as the mental health impact of stressors. A potentially large number of baseline characteristics can then be linked to this individual response by regularized regression, e.g., for identifying resilience factors. Thus, our new method provides a way of connecting different kinds of complex longitudinal and baseline measures via individualized, dynamic models. The promising results obtained in the exemplary resilience application indicate that our proposal for dynamic deep learning might also be more generally useful for other application domains. |
format | Online Article Text |
id | pubmed-9110739 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-91107392022-05-18 Individualizing deep dynamic models for psychological resilience data Köber, Göran Pooseh, Shakoor Engen, Haakon Chmitorz, Andrea Kampa, Miriam Schick, Anita Sebastian, Alexandra Tüscher, Oliver Wessa, Michèle Yuen, Kenneth S. L. Walter, Henrik Kalisch, Raffael Timmer, Jens Binder, Harald Sci Rep Article Deep learning approaches can uncover complex patterns in data. In particular, variational autoencoders achieve this by a non-linear mapping of data into a low-dimensional latent space. Motivated by an application to psychological resilience in the Mainz Resilience Project, which features intermittent longitudinal measurements of stressors and mental health, we propose an approach for individualized, dynamic modeling in this latent space. Specifically, we utilize ordinary differential equations (ODEs) and develop a novel technique for obtaining person-specific ODE parameters even in settings with a rather small number of individuals and observations, incomplete data, and a differing number of observations per individual. This technique allows us to subsequently investigate individual reactions to stimuli, such as the mental health impact of stressors. A potentially large number of baseline characteristics can then be linked to this individual response by regularized regression, e.g., for identifying resilience factors. Thus, our new method provides a way of connecting different kinds of complex longitudinal and baseline measures via individualized, dynamic models. The promising results obtained in the exemplary resilience application indicate that our proposal for dynamic deep learning might also be more generally useful for other application domains. Nature Publishing Group UK 2022-05-16 /pmc/articles/PMC9110739/ /pubmed/35577829 http://dx.doi.org/10.1038/s41598-022-11650-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Köber, Göran Pooseh, Shakoor Engen, Haakon Chmitorz, Andrea Kampa, Miriam Schick, Anita Sebastian, Alexandra Tüscher, Oliver Wessa, Michèle Yuen, Kenneth S. L. Walter, Henrik Kalisch, Raffael Timmer, Jens Binder, Harald Individualizing deep dynamic models for psychological resilience data |
title | Individualizing deep dynamic models for psychological resilience data |
title_full | Individualizing deep dynamic models for psychological resilience data |
title_fullStr | Individualizing deep dynamic models for psychological resilience data |
title_full_unstemmed | Individualizing deep dynamic models for psychological resilience data |
title_short | Individualizing deep dynamic models for psychological resilience data |
title_sort | individualizing deep dynamic models for psychological resilience data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9110739/ https://www.ncbi.nlm.nih.gov/pubmed/35577829 http://dx.doi.org/10.1038/s41598-022-11650-6 |
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