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Web-Based Software Tools for Systematic Literature Review in Medicine: Systematic Search and Feature Analysis

BACKGROUND: Systematic reviews (SRs) are central to evaluating therapies but have high costs in terms of both time and money. Many software tools exist to assist with SRs, but most tools do not support the full process, and transparency and replicability of SR depend on performing and presenting evi...

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Autores principales: Cowie, Kathryn, Rahmatullah, Asad, Hardy, Nicole, Holub, Karl, Kallmes, Kevin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9112080/
https://www.ncbi.nlm.nih.gov/pubmed/35499859
http://dx.doi.org/10.2196/33219
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author Cowie, Kathryn
Rahmatullah, Asad
Hardy, Nicole
Holub, Karl
Kallmes, Kevin
author_facet Cowie, Kathryn
Rahmatullah, Asad
Hardy, Nicole
Holub, Karl
Kallmes, Kevin
author_sort Cowie, Kathryn
collection PubMed
description BACKGROUND: Systematic reviews (SRs) are central to evaluating therapies but have high costs in terms of both time and money. Many software tools exist to assist with SRs, but most tools do not support the full process, and transparency and replicability of SR depend on performing and presenting evidence according to established best practices. OBJECTIVE: This study aims to provide a basis for comparing and selecting between web-based software tools that support SR, by conducting a feature-by-feature comparison of SR tools. METHODS: We searched for SR tools by reviewing any such tool listed in the SR Toolbox, previous reviews of SR tools, and qualitative Google searching. We included all SR tools that were currently functional and required no coding, and excluded reference managers, desktop applications, and statistical software. The list of features to assess was populated by combining all features assessed in 4 previous reviews of SR tools; we also added 5 features (manual addition, screening automation, dual extraction, living review, and public outputs) that were independently noted as best practices or enhancements of transparency and replicability. Then, 2 reviewers assigned binary present or absent assessments to all SR tools with respect to all features, and a third reviewer adjudicated all disagreements. RESULTS: Of the 53 SR tools found, 55% (29/53) were excluded, leaving 45% (24/53) for assessment. In total, 30 features were assessed across 6 classes, and the interobserver agreement was 86.46%. Giotto Compliance (27/30, 90%), DistillerSR (26/30, 87%), and Nested Knowledge (26/30, 87%) support the most features, followed by EPPI-Reviewer Web (25/30, 83%), LitStream (23/30, 77%), JBI SUMARI (21/30, 70%), and SRDB.PRO (VTS Software) (21/30, 70%). Fewer than half of all the features assessed are supported by 7 tools: RobotAnalyst (National Centre for Text Mining), SRDR (Agency for Healthcare Research and Quality), SyRF (Systematic Review Facility), Data Abstraction Assistant (Center for Evidence Synthesis in Health), SR Accelerator (Institute for Evidence-Based Healthcare), RobotReviewer (RobotReviewer), and COVID-NMA (COVID-NMA). Notably, of the 24 tools, only 10 (42%) support direct search, only 7 (29%) offer dual extraction, and only 13 (54%) offer living/updatable reviews. CONCLUSIONS: DistillerSR, Nested Knowledge, and EPPI-Reviewer Web each offer a high density of SR-focused web-based tools. By transparent comparison and discussion regarding SR tool functionality, the medical community can both choose among existing software offerings and note the areas of growth needed, most notably in the support of living reviews.
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spelling pubmed-91120802022-05-18 Web-Based Software Tools for Systematic Literature Review in Medicine: Systematic Search and Feature Analysis Cowie, Kathryn Rahmatullah, Asad Hardy, Nicole Holub, Karl Kallmes, Kevin JMIR Med Inform Original Paper BACKGROUND: Systematic reviews (SRs) are central to evaluating therapies but have high costs in terms of both time and money. Many software tools exist to assist with SRs, but most tools do not support the full process, and transparency and replicability of SR depend on performing and presenting evidence according to established best practices. OBJECTIVE: This study aims to provide a basis for comparing and selecting between web-based software tools that support SR, by conducting a feature-by-feature comparison of SR tools. METHODS: We searched for SR tools by reviewing any such tool listed in the SR Toolbox, previous reviews of SR tools, and qualitative Google searching. We included all SR tools that were currently functional and required no coding, and excluded reference managers, desktop applications, and statistical software. The list of features to assess was populated by combining all features assessed in 4 previous reviews of SR tools; we also added 5 features (manual addition, screening automation, dual extraction, living review, and public outputs) that were independently noted as best practices or enhancements of transparency and replicability. Then, 2 reviewers assigned binary present or absent assessments to all SR tools with respect to all features, and a third reviewer adjudicated all disagreements. RESULTS: Of the 53 SR tools found, 55% (29/53) were excluded, leaving 45% (24/53) for assessment. In total, 30 features were assessed across 6 classes, and the interobserver agreement was 86.46%. Giotto Compliance (27/30, 90%), DistillerSR (26/30, 87%), and Nested Knowledge (26/30, 87%) support the most features, followed by EPPI-Reviewer Web (25/30, 83%), LitStream (23/30, 77%), JBI SUMARI (21/30, 70%), and SRDB.PRO (VTS Software) (21/30, 70%). Fewer than half of all the features assessed are supported by 7 tools: RobotAnalyst (National Centre for Text Mining), SRDR (Agency for Healthcare Research and Quality), SyRF (Systematic Review Facility), Data Abstraction Assistant (Center for Evidence Synthesis in Health), SR Accelerator (Institute for Evidence-Based Healthcare), RobotReviewer (RobotReviewer), and COVID-NMA (COVID-NMA). Notably, of the 24 tools, only 10 (42%) support direct search, only 7 (29%) offer dual extraction, and only 13 (54%) offer living/updatable reviews. CONCLUSIONS: DistillerSR, Nested Knowledge, and EPPI-Reviewer Web each offer a high density of SR-focused web-based tools. By transparent comparison and discussion regarding SR tool functionality, the medical community can both choose among existing software offerings and note the areas of growth needed, most notably in the support of living reviews. JMIR Publications 2022-05-02 /pmc/articles/PMC9112080/ /pubmed/35499859 http://dx.doi.org/10.2196/33219 Text en ©Kathryn Cowie, Asad Rahmatullah, Nicole Hardy, Karl Holub, Kevin Kallmes. Originally published in JMIR Medical Informatics (https://medinform.jmir.org), 02.05.2022. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on https://medinform.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Cowie, Kathryn
Rahmatullah, Asad
Hardy, Nicole
Holub, Karl
Kallmes, Kevin
Web-Based Software Tools for Systematic Literature Review in Medicine: Systematic Search and Feature Analysis
title Web-Based Software Tools for Systematic Literature Review in Medicine: Systematic Search and Feature Analysis
title_full Web-Based Software Tools for Systematic Literature Review in Medicine: Systematic Search and Feature Analysis
title_fullStr Web-Based Software Tools for Systematic Literature Review in Medicine: Systematic Search and Feature Analysis
title_full_unstemmed Web-Based Software Tools for Systematic Literature Review in Medicine: Systematic Search and Feature Analysis
title_short Web-Based Software Tools for Systematic Literature Review in Medicine: Systematic Search and Feature Analysis
title_sort web-based software tools for systematic literature review in medicine: systematic search and feature analysis
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9112080/
https://www.ncbi.nlm.nih.gov/pubmed/35499859
http://dx.doi.org/10.2196/33219
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