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Predicting acute kidney injury following open partial nephrectomy treatment using SAT-pruned explainable machine learning model
BACKGROUND: One of the most prevalent complications of Partial Nephrectomy (PN) is Acute Kidney Injury (AKI), which could have a negative impact on subsequent renal function and occurs in up to 24.3% of patients undergoing PN. The aim of this study was to predict the occurrence of AKI following PN u...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9112450/ https://www.ncbi.nlm.nih.gov/pubmed/35578278 http://dx.doi.org/10.1186/s12911-022-01877-8 |
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author | Lazebnik, Teddy Bahouth, Zaher Bunimovich-Mendrazitsky, Svetlana Halachmi, Sarel |
author_facet | Lazebnik, Teddy Bahouth, Zaher Bunimovich-Mendrazitsky, Svetlana Halachmi, Sarel |
author_sort | Lazebnik, Teddy |
collection | PubMed |
description | BACKGROUND: One of the most prevalent complications of Partial Nephrectomy (PN) is Acute Kidney Injury (AKI), which could have a negative impact on subsequent renal function and occurs in up to 24.3% of patients undergoing PN. The aim of this study was to predict the occurrence of AKI following PN using preoperative parameters by applying machine learning algorithms. METHODS: We included all adult patients (n = 723) who underwent open PN in our department since 1995 and on whom we have data on the pre-operative renal function. We developed a random forest (RF) model with Boolean satisfaction-based pruned decision trees for binary classification (AKI or non-AKI). Hyper-parameter grid search was performed to optimize the model's performance. Fivefold cross-validation was applied to evaluate the model. We implemented a RF model with greedy feature selection to binary classify AKI and non-AKI cases based on pre-operative data. RESULTS: The best model obtained a 0.69 precision and 0.69 recall in classifying the AKI and non-AKI groups on average (k = 5). In addition, the model's probability to correctly classify a new prediction is 0.75. The proposed model is available as an online calculator. CONCLUSIONS: Our model predicts the occurrence of AKI following open PN with (75%) accuracy. We plan to externally validate this model and modify it to minimally-invasive PN. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12911-022-01877-8. |
format | Online Article Text |
id | pubmed-9112450 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-91124502022-05-18 Predicting acute kidney injury following open partial nephrectomy treatment using SAT-pruned explainable machine learning model Lazebnik, Teddy Bahouth, Zaher Bunimovich-Mendrazitsky, Svetlana Halachmi, Sarel BMC Med Inform Decis Mak Research Article BACKGROUND: One of the most prevalent complications of Partial Nephrectomy (PN) is Acute Kidney Injury (AKI), which could have a negative impact on subsequent renal function and occurs in up to 24.3% of patients undergoing PN. The aim of this study was to predict the occurrence of AKI following PN using preoperative parameters by applying machine learning algorithms. METHODS: We included all adult patients (n = 723) who underwent open PN in our department since 1995 and on whom we have data on the pre-operative renal function. We developed a random forest (RF) model with Boolean satisfaction-based pruned decision trees for binary classification (AKI or non-AKI). Hyper-parameter grid search was performed to optimize the model's performance. Fivefold cross-validation was applied to evaluate the model. We implemented a RF model with greedy feature selection to binary classify AKI and non-AKI cases based on pre-operative data. RESULTS: The best model obtained a 0.69 precision and 0.69 recall in classifying the AKI and non-AKI groups on average (k = 5). In addition, the model's probability to correctly classify a new prediction is 0.75. The proposed model is available as an online calculator. CONCLUSIONS: Our model predicts the occurrence of AKI following open PN with (75%) accuracy. We plan to externally validate this model and modify it to minimally-invasive PN. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12911-022-01877-8. BioMed Central 2022-05-16 /pmc/articles/PMC9112450/ /pubmed/35578278 http://dx.doi.org/10.1186/s12911-022-01877-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Lazebnik, Teddy Bahouth, Zaher Bunimovich-Mendrazitsky, Svetlana Halachmi, Sarel Predicting acute kidney injury following open partial nephrectomy treatment using SAT-pruned explainable machine learning model |
title | Predicting acute kidney injury following open partial nephrectomy treatment using SAT-pruned explainable machine learning model |
title_full | Predicting acute kidney injury following open partial nephrectomy treatment using SAT-pruned explainable machine learning model |
title_fullStr | Predicting acute kidney injury following open partial nephrectomy treatment using SAT-pruned explainable machine learning model |
title_full_unstemmed | Predicting acute kidney injury following open partial nephrectomy treatment using SAT-pruned explainable machine learning model |
title_short | Predicting acute kidney injury following open partial nephrectomy treatment using SAT-pruned explainable machine learning model |
title_sort | predicting acute kidney injury following open partial nephrectomy treatment using sat-pruned explainable machine learning model |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9112450/ https://www.ncbi.nlm.nih.gov/pubmed/35578278 http://dx.doi.org/10.1186/s12911-022-01877-8 |
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