Cargando…

Deep learning model for the automatic classification of COVID-19 pneumonia, non-COVID-19 pneumonia, and the healthy: a multi-center retrospective study

This retrospective study aimed to develop and validate a deep learning model for the classification of coronavirus disease-2019 (COVID-19) pneumonia, non-COVID-19 pneumonia, and the healthy using chest X-ray (CXR) images. One private and two public datasets of CXR images were included. The private d...

Descripción completa

Detalles Bibliográficos
Autores principales: Nishio, Mizuho, Kobayashi, Daigo, Nishioka, Eiko, Matsuo, Hidetoshi, Urase, Yasuyo, Onoue, Koji, Ishikura, Reiichi, Kitamura, Yuri, Sakai, Eiro, Tomita, Masaru, Hamanaka, Akihiro, Murakami, Takamichi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9113076/
https://www.ncbi.nlm.nih.gov/pubmed/35581272
http://dx.doi.org/10.1038/s41598-022-11990-3
_version_ 1784709521068785664
author Nishio, Mizuho
Kobayashi, Daigo
Nishioka, Eiko
Matsuo, Hidetoshi
Urase, Yasuyo
Onoue, Koji
Ishikura, Reiichi
Kitamura, Yuri
Sakai, Eiro
Tomita, Masaru
Hamanaka, Akihiro
Murakami, Takamichi
author_facet Nishio, Mizuho
Kobayashi, Daigo
Nishioka, Eiko
Matsuo, Hidetoshi
Urase, Yasuyo
Onoue, Koji
Ishikura, Reiichi
Kitamura, Yuri
Sakai, Eiro
Tomita, Masaru
Hamanaka, Akihiro
Murakami, Takamichi
author_sort Nishio, Mizuho
collection PubMed
description This retrospective study aimed to develop and validate a deep learning model for the classification of coronavirus disease-2019 (COVID-19) pneumonia, non-COVID-19 pneumonia, and the healthy using chest X-ray (CXR) images. One private and two public datasets of CXR images were included. The private dataset included CXR from six hospitals. A total of 14,258 and 11,253 CXR images were included in the 2 public datasets and 455 in the private dataset. A deep learning model based on EfficientNet with noisy student was constructed using the three datasets. The test set of 150 CXR images in the private dataset were evaluated by the deep learning model and six radiologists. Three-category classification accuracy and class-wise area under the curve (AUC) for each of the COVID-19 pneumonia, non-COVID-19 pneumonia, and healthy were calculated. Consensus of the six radiologists was used for calculating class-wise AUC. The three-category classification accuracy of our model was 0.8667, and those of the six radiologists ranged from 0.5667 to 0.7733. For our model and the consensus of the six radiologists, the class-wise AUC of the healthy, non-COVID-19 pneumonia, and COVID-19 pneumonia were 0.9912, 0.9492, and 0.9752 and 0.9656, 0.8654, and 0.8740, respectively. Difference of the class-wise AUC between our model and the consensus of the six radiologists was statistically significant for COVID-19 pneumonia (p value = 0.001334). Thus, an accurate model of deep learning for the three-category classification could be constructed; the diagnostic performance of our model was significantly better than that of the consensus interpretation by the six radiologists for COVID-19 pneumonia.
format Online
Article
Text
id pubmed-9113076
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-91130762022-05-18 Deep learning model for the automatic classification of COVID-19 pneumonia, non-COVID-19 pneumonia, and the healthy: a multi-center retrospective study Nishio, Mizuho Kobayashi, Daigo Nishioka, Eiko Matsuo, Hidetoshi Urase, Yasuyo Onoue, Koji Ishikura, Reiichi Kitamura, Yuri Sakai, Eiro Tomita, Masaru Hamanaka, Akihiro Murakami, Takamichi Sci Rep Article This retrospective study aimed to develop and validate a deep learning model for the classification of coronavirus disease-2019 (COVID-19) pneumonia, non-COVID-19 pneumonia, and the healthy using chest X-ray (CXR) images. One private and two public datasets of CXR images were included. The private dataset included CXR from six hospitals. A total of 14,258 and 11,253 CXR images were included in the 2 public datasets and 455 in the private dataset. A deep learning model based on EfficientNet with noisy student was constructed using the three datasets. The test set of 150 CXR images in the private dataset were evaluated by the deep learning model and six radiologists. Three-category classification accuracy and class-wise area under the curve (AUC) for each of the COVID-19 pneumonia, non-COVID-19 pneumonia, and healthy were calculated. Consensus of the six radiologists was used for calculating class-wise AUC. The three-category classification accuracy of our model was 0.8667, and those of the six radiologists ranged from 0.5667 to 0.7733. For our model and the consensus of the six radiologists, the class-wise AUC of the healthy, non-COVID-19 pneumonia, and COVID-19 pneumonia were 0.9912, 0.9492, and 0.9752 and 0.9656, 0.8654, and 0.8740, respectively. Difference of the class-wise AUC between our model and the consensus of the six radiologists was statistically significant for COVID-19 pneumonia (p value = 0.001334). Thus, an accurate model of deep learning for the three-category classification could be constructed; the diagnostic performance of our model was significantly better than that of the consensus interpretation by the six radiologists for COVID-19 pneumonia. Nature Publishing Group UK 2022-05-17 /pmc/articles/PMC9113076/ /pubmed/35581272 http://dx.doi.org/10.1038/s41598-022-11990-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Nishio, Mizuho
Kobayashi, Daigo
Nishioka, Eiko
Matsuo, Hidetoshi
Urase, Yasuyo
Onoue, Koji
Ishikura, Reiichi
Kitamura, Yuri
Sakai, Eiro
Tomita, Masaru
Hamanaka, Akihiro
Murakami, Takamichi
Deep learning model for the automatic classification of COVID-19 pneumonia, non-COVID-19 pneumonia, and the healthy: a multi-center retrospective study
title Deep learning model for the automatic classification of COVID-19 pneumonia, non-COVID-19 pneumonia, and the healthy: a multi-center retrospective study
title_full Deep learning model for the automatic classification of COVID-19 pneumonia, non-COVID-19 pneumonia, and the healthy: a multi-center retrospective study
title_fullStr Deep learning model for the automatic classification of COVID-19 pneumonia, non-COVID-19 pneumonia, and the healthy: a multi-center retrospective study
title_full_unstemmed Deep learning model for the automatic classification of COVID-19 pneumonia, non-COVID-19 pneumonia, and the healthy: a multi-center retrospective study
title_short Deep learning model for the automatic classification of COVID-19 pneumonia, non-COVID-19 pneumonia, and the healthy: a multi-center retrospective study
title_sort deep learning model for the automatic classification of covid-19 pneumonia, non-covid-19 pneumonia, and the healthy: a multi-center retrospective study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9113076/
https://www.ncbi.nlm.nih.gov/pubmed/35581272
http://dx.doi.org/10.1038/s41598-022-11990-3
work_keys_str_mv AT nishiomizuho deeplearningmodelfortheautomaticclassificationofcovid19pneumonianoncovid19pneumoniaandthehealthyamulticenterretrospectivestudy
AT kobayashidaigo deeplearningmodelfortheautomaticclassificationofcovid19pneumonianoncovid19pneumoniaandthehealthyamulticenterretrospectivestudy
AT nishiokaeiko deeplearningmodelfortheautomaticclassificationofcovid19pneumonianoncovid19pneumoniaandthehealthyamulticenterretrospectivestudy
AT matsuohidetoshi deeplearningmodelfortheautomaticclassificationofcovid19pneumonianoncovid19pneumoniaandthehealthyamulticenterretrospectivestudy
AT uraseyasuyo deeplearningmodelfortheautomaticclassificationofcovid19pneumonianoncovid19pneumoniaandthehealthyamulticenterretrospectivestudy
AT onouekoji deeplearningmodelfortheautomaticclassificationofcovid19pneumonianoncovid19pneumoniaandthehealthyamulticenterretrospectivestudy
AT ishikurareiichi deeplearningmodelfortheautomaticclassificationofcovid19pneumonianoncovid19pneumoniaandthehealthyamulticenterretrospectivestudy
AT kitamurayuri deeplearningmodelfortheautomaticclassificationofcovid19pneumonianoncovid19pneumoniaandthehealthyamulticenterretrospectivestudy
AT sakaieiro deeplearningmodelfortheautomaticclassificationofcovid19pneumonianoncovid19pneumoniaandthehealthyamulticenterretrospectivestudy
AT tomitamasaru deeplearningmodelfortheautomaticclassificationofcovid19pneumonianoncovid19pneumoniaandthehealthyamulticenterretrospectivestudy
AT hamanakaakihiro deeplearningmodelfortheautomaticclassificationofcovid19pneumonianoncovid19pneumoniaandthehealthyamulticenterretrospectivestudy
AT murakamitakamichi deeplearningmodelfortheautomaticclassificationofcovid19pneumonianoncovid19pneumoniaandthehealthyamulticenterretrospectivestudy