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Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models

Brazil presents large yield gaps in garlic crops partly due to nutrient mismanagement at local scale. Machine learning (ML) provides powerful tools to handle numerous combinations of yield-impacting factors that help reducing the number of assumptions about nutrient management. The aim of the curren...

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Autores principales: Hahn, Leandro, Parent, Léon-Étienne, Paviani, Angela Cristina, Feltrim, Anderson Luiz, Wamser, Anderson Fernando, Rozane, Danilo Eduardo, Ender, Marcos Matos, Grando, Douglas Luiz, Moura-Bueno, Jean Michel, Brunetto, Gustavo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9113611/
https://www.ncbi.nlm.nih.gov/pubmed/35580085
http://dx.doi.org/10.1371/journal.pone.0268516
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author Hahn, Leandro
Parent, Léon-Étienne
Paviani, Angela Cristina
Feltrim, Anderson Luiz
Wamser, Anderson Fernando
Rozane, Danilo Eduardo
Ender, Marcos Matos
Grando, Douglas Luiz
Moura-Bueno, Jean Michel
Brunetto, Gustavo
author_facet Hahn, Leandro
Parent, Léon-Étienne
Paviani, Angela Cristina
Feltrim, Anderson Luiz
Wamser, Anderson Fernando
Rozane, Danilo Eduardo
Ender, Marcos Matos
Grando, Douglas Luiz
Moura-Bueno, Jean Michel
Brunetto, Gustavo
author_sort Hahn, Leandro
collection PubMed
description Brazil presents large yield gaps in garlic crops partly due to nutrient mismanagement at local scale. Machine learning (ML) provides powerful tools to handle numerous combinations of yield-impacting factors that help reducing the number of assumptions about nutrient management. The aim of the current study is to customize fertilizer recommendations to reach high garlic marketable yield at local scale in a pilot study. Thus, collected 15 nitrogen (N), 24 phosphorus (P), and 27 potassium (K) field experiments conducted during the 2015 to 2017 period in Santa Catarina state, Brazil. In addition, 61 growers’ observational data were collected in the same region in 2018 and 2019. The data set was split into 979 experimental and observational data for model calibration and into 45 experimental data (2016) to test ML models and compare the results to state recommendations. Random Forest (RF) was the most accurate ML to predict marketable yield after cropping system (cultivar, preceding crops), climatic indices, soil test and fertilization were included features as predictor (R(2) = 0.886). Random Forest remained the most accurate ML model (R(2) = 0.882) after excluding cultivar and climatic features from the prediction-making process. The model suggested the application of 200 kg N ha(-1) to reach maximum marketable yield in a test site in comparison to the 300 kg N ha(-1) set as state recommendation. P and K fertilization also seemed to be excessive, and it highlights the great potential to reduce production costs and environmental footprint without agronomic loss. Garlic root colonization by arbuscular mycorrhizal fungi likely contributed to P and K uptake. Well-documented data sets and machine learning models could support technology transfer, reduce costs with fertilizers and yield gaps, and sustain the Brazilian garlic production.
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spelling pubmed-91136112022-05-18 Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models Hahn, Leandro Parent, Léon-Étienne Paviani, Angela Cristina Feltrim, Anderson Luiz Wamser, Anderson Fernando Rozane, Danilo Eduardo Ender, Marcos Matos Grando, Douglas Luiz Moura-Bueno, Jean Michel Brunetto, Gustavo PLoS One Research Article Brazil presents large yield gaps in garlic crops partly due to nutrient mismanagement at local scale. Machine learning (ML) provides powerful tools to handle numerous combinations of yield-impacting factors that help reducing the number of assumptions about nutrient management. The aim of the current study is to customize fertilizer recommendations to reach high garlic marketable yield at local scale in a pilot study. Thus, collected 15 nitrogen (N), 24 phosphorus (P), and 27 potassium (K) field experiments conducted during the 2015 to 2017 period in Santa Catarina state, Brazil. In addition, 61 growers’ observational data were collected in the same region in 2018 and 2019. The data set was split into 979 experimental and observational data for model calibration and into 45 experimental data (2016) to test ML models and compare the results to state recommendations. Random Forest (RF) was the most accurate ML to predict marketable yield after cropping system (cultivar, preceding crops), climatic indices, soil test and fertilization were included features as predictor (R(2) = 0.886). Random Forest remained the most accurate ML model (R(2) = 0.882) after excluding cultivar and climatic features from the prediction-making process. The model suggested the application of 200 kg N ha(-1) to reach maximum marketable yield in a test site in comparison to the 300 kg N ha(-1) set as state recommendation. P and K fertilization also seemed to be excessive, and it highlights the great potential to reduce production costs and environmental footprint without agronomic loss. Garlic root colonization by arbuscular mycorrhizal fungi likely contributed to P and K uptake. Well-documented data sets and machine learning models could support technology transfer, reduce costs with fertilizers and yield gaps, and sustain the Brazilian garlic production. Public Library of Science 2022-05-17 /pmc/articles/PMC9113611/ /pubmed/35580085 http://dx.doi.org/10.1371/journal.pone.0268516 Text en © 2022 Hahn et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Hahn, Leandro
Parent, Léon-Étienne
Paviani, Angela Cristina
Feltrim, Anderson Luiz
Wamser, Anderson Fernando
Rozane, Danilo Eduardo
Ender, Marcos Matos
Grando, Douglas Luiz
Moura-Bueno, Jean Michel
Brunetto, Gustavo
Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
title Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
title_full Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
title_fullStr Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
title_full_unstemmed Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
title_short Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models
title_sort garlic (allium sativum) feature-specific nutrient dosage based on using machine learning models
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9113611/
https://www.ncbi.nlm.nih.gov/pubmed/35580085
http://dx.doi.org/10.1371/journal.pone.0268516
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