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An immune gene signature to predict prognosis and immunotherapeutic response in lung adenocarcinoma

Lung adenocarcinoma is one of the most common malignant tumors worldwide. The purpose of this study was to construct a stable immune gene signature for prediction of prognosis (IGSPP) and response to immune checkpoint inhibitors (ICIs) therapy in LUAD patients. Five genes were screened by weighted g...

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Autores principales: Chen, Hongquan, Lin, Renxi, Lin, Weibin, Chen, Qing, Ye, Dongjie, Li, Jing, Feng, Jinan, Cheng, Wenxiu, Zhang, Mingfang, Qi, Yuanlin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9114138/
https://www.ncbi.nlm.nih.gov/pubmed/35581376
http://dx.doi.org/10.1038/s41598-022-12301-6
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author Chen, Hongquan
Lin, Renxi
Lin, Weibin
Chen, Qing
Ye, Dongjie
Li, Jing
Feng, Jinan
Cheng, Wenxiu
Zhang, Mingfang
Qi, Yuanlin
author_facet Chen, Hongquan
Lin, Renxi
Lin, Weibin
Chen, Qing
Ye, Dongjie
Li, Jing
Feng, Jinan
Cheng, Wenxiu
Zhang, Mingfang
Qi, Yuanlin
author_sort Chen, Hongquan
collection PubMed
description Lung adenocarcinoma is one of the most common malignant tumors worldwide. The purpose of this study was to construct a stable immune gene signature for prediction of prognosis (IGSPP) and response to immune checkpoint inhibitors (ICIs) therapy in LUAD patients. Five genes were screened by weighted gene coexpression network analysis, Cox regression and LASSO regression analyses and were used to construct the IGSPP. The survival rate of the IGSPP low-risk group was higher than that of the IGSPP high-risk group. Multivariate Cox regression analysis showed that IGSPP could be used as an independent prognostic factor for the overall survival of LUAD patients. IGSPP genes were enriched in cell cycle pathways. IGSPP gene mutation rates were higher in the high-risk group. CD4 memory-activated T cells, M0 and M1 macrophages had higher infiltration abundance in the high-risk group, which was associated with poor overall survival. In contrast, the abundance of resting CD4 memory T cells, monocytes, resting dendritic cells and resting mast cells associated with a better prognosis was higher in the low-risk group. TIDE scores and the expressions of different immune checkpoints showed that patients in the high-risk IGSPP group benefited more from ICIs treatment. In short, an IGSPP of LUAD was constructed and characterized. It could be used to predict the prognosis and benefits of ICIs treatment in LUAD patients.
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spelling pubmed-91141382022-05-19 An immune gene signature to predict prognosis and immunotherapeutic response in lung adenocarcinoma Chen, Hongquan Lin, Renxi Lin, Weibin Chen, Qing Ye, Dongjie Li, Jing Feng, Jinan Cheng, Wenxiu Zhang, Mingfang Qi, Yuanlin Sci Rep Article Lung adenocarcinoma is one of the most common malignant tumors worldwide. The purpose of this study was to construct a stable immune gene signature for prediction of prognosis (IGSPP) and response to immune checkpoint inhibitors (ICIs) therapy in LUAD patients. Five genes were screened by weighted gene coexpression network analysis, Cox regression and LASSO regression analyses and were used to construct the IGSPP. The survival rate of the IGSPP low-risk group was higher than that of the IGSPP high-risk group. Multivariate Cox regression analysis showed that IGSPP could be used as an independent prognostic factor for the overall survival of LUAD patients. IGSPP genes were enriched in cell cycle pathways. IGSPP gene mutation rates were higher in the high-risk group. CD4 memory-activated T cells, M0 and M1 macrophages had higher infiltration abundance in the high-risk group, which was associated with poor overall survival. In contrast, the abundance of resting CD4 memory T cells, monocytes, resting dendritic cells and resting mast cells associated with a better prognosis was higher in the low-risk group. TIDE scores and the expressions of different immune checkpoints showed that patients in the high-risk IGSPP group benefited more from ICIs treatment. In short, an IGSPP of LUAD was constructed and characterized. It could be used to predict the prognosis and benefits of ICIs treatment in LUAD patients. Nature Publishing Group UK 2022-05-17 /pmc/articles/PMC9114138/ /pubmed/35581376 http://dx.doi.org/10.1038/s41598-022-12301-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Chen, Hongquan
Lin, Renxi
Lin, Weibin
Chen, Qing
Ye, Dongjie
Li, Jing
Feng, Jinan
Cheng, Wenxiu
Zhang, Mingfang
Qi, Yuanlin
An immune gene signature to predict prognosis and immunotherapeutic response in lung adenocarcinoma
title An immune gene signature to predict prognosis and immunotherapeutic response in lung adenocarcinoma
title_full An immune gene signature to predict prognosis and immunotherapeutic response in lung adenocarcinoma
title_fullStr An immune gene signature to predict prognosis and immunotherapeutic response in lung adenocarcinoma
title_full_unstemmed An immune gene signature to predict prognosis and immunotherapeutic response in lung adenocarcinoma
title_short An immune gene signature to predict prognosis and immunotherapeutic response in lung adenocarcinoma
title_sort immune gene signature to predict prognosis and immunotherapeutic response in lung adenocarcinoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9114138/
https://www.ncbi.nlm.nih.gov/pubmed/35581376
http://dx.doi.org/10.1038/s41598-022-12301-6
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