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Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods

OBJECTIVE: Based on the respiratory disease big data platform in southern Xinjiang, we established a model that predicted and diagnosed chronic obstructive pulmonary disease, bronchiectasis, pulmonary embolism and pulmonary tuberculosis, and provided assistance for primary physicians. METHODS: The m...

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Autores principales: Li, Li, Ayiguli, Alimu, Luan, Qiyun, Yang, Boyi, Subinuer, Yilamujiang, Gong, Hui, Zulipikaer, Abudureherman, Xu, Jingran, Zhong, Xuemei, Ren, Jiangtao, Zou, Xiaoguang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9114643/
https://www.ncbi.nlm.nih.gov/pubmed/35602136
http://dx.doi.org/10.3389/fpubh.2022.881234
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author Li, Li
Ayiguli, Alimu
Luan, Qiyun
Yang, Boyi
Subinuer, Yilamujiang
Gong, Hui
Zulipikaer, Abudureherman
Xu, Jingran
Zhong, Xuemei
Ren, Jiangtao
Zou, Xiaoguang
author_facet Li, Li
Ayiguli, Alimu
Luan, Qiyun
Yang, Boyi
Subinuer, Yilamujiang
Gong, Hui
Zulipikaer, Abudureherman
Xu, Jingran
Zhong, Xuemei
Ren, Jiangtao
Zou, Xiaoguang
author_sort Li, Li
collection PubMed
description OBJECTIVE: Based on the respiratory disease big data platform in southern Xinjiang, we established a model that predicted and diagnosed chronic obstructive pulmonary disease, bronchiectasis, pulmonary embolism and pulmonary tuberculosis, and provided assistance for primary physicians. METHODS: The method combined convolutional neural network (CNN) and long-short-term memory network (LSTM) for prediction and diagnosis of respiratory diseases. We collected the medical records of inpatients in the respiratory department, including: chief complaint, history of present illness, and chest computed tomography. Pre-processing of clinical records with “jieba” word segmentation module, and the Bidirectional Encoder Representation from Transformers (BERT) model was used to perform word vectorization on the text. The partial and total information of the fused feature set was encoded by convolutional layers, while LSTM layers decoded the encoded information. RESULTS: The precisions of traditional machine-learning, deep-learning methods and our proposed method were 0.6, 0.81, 0.89, and F1 scores were 0.6, 0.81, 0.88, respectively. CONCLUSION: Compared with traditional machine learning and deep-learning methods that our proposed method had a significantly higher performance, and provided precise identification of respiratory disease.
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spelling pubmed-91146432022-05-19 Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods Li, Li Ayiguli, Alimu Luan, Qiyun Yang, Boyi Subinuer, Yilamujiang Gong, Hui Zulipikaer, Abudureherman Xu, Jingran Zhong, Xuemei Ren, Jiangtao Zou, Xiaoguang Front Public Health Public Health OBJECTIVE: Based on the respiratory disease big data platform in southern Xinjiang, we established a model that predicted and diagnosed chronic obstructive pulmonary disease, bronchiectasis, pulmonary embolism and pulmonary tuberculosis, and provided assistance for primary physicians. METHODS: The method combined convolutional neural network (CNN) and long-short-term memory network (LSTM) for prediction and diagnosis of respiratory diseases. We collected the medical records of inpatients in the respiratory department, including: chief complaint, history of present illness, and chest computed tomography. Pre-processing of clinical records with “jieba” word segmentation module, and the Bidirectional Encoder Representation from Transformers (BERT) model was used to perform word vectorization on the text. The partial and total information of the fused feature set was encoded by convolutional layers, while LSTM layers decoded the encoded information. RESULTS: The precisions of traditional machine-learning, deep-learning methods and our proposed method were 0.6, 0.81, 0.89, and F1 scores were 0.6, 0.81, 0.88, respectively. CONCLUSION: Compared with traditional machine learning and deep-learning methods that our proposed method had a significantly higher performance, and provided precise identification of respiratory disease. Frontiers Media S.A. 2022-05-04 /pmc/articles/PMC9114643/ /pubmed/35602136 http://dx.doi.org/10.3389/fpubh.2022.881234 Text en Copyright © 2022 Li, Ayiguli, Luan, Yang, Subinuer, Gong, Zulipikaer, Xu, Zhong, Ren and Zou. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Public Health
Li, Li
Ayiguli, Alimu
Luan, Qiyun
Yang, Boyi
Subinuer, Yilamujiang
Gong, Hui
Zulipikaer, Abudureherman
Xu, Jingran
Zhong, Xuemei
Ren, Jiangtao
Zou, Xiaoguang
Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods
title Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods
title_full Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods
title_fullStr Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods
title_full_unstemmed Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods
title_short Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods
title_sort prediction and diagnosis of respiratory disease by combining convolutional neural network and bi-directional long short-term memory methods
topic Public Health
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9114643/
https://www.ncbi.nlm.nih.gov/pubmed/35602136
http://dx.doi.org/10.3389/fpubh.2022.881234
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