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Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods
OBJECTIVE: Based on the respiratory disease big data platform in southern Xinjiang, we established a model that predicted and diagnosed chronic obstructive pulmonary disease, bronchiectasis, pulmonary embolism and pulmonary tuberculosis, and provided assistance for primary physicians. METHODS: The m...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9114643/ https://www.ncbi.nlm.nih.gov/pubmed/35602136 http://dx.doi.org/10.3389/fpubh.2022.881234 |
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author | Li, Li Ayiguli, Alimu Luan, Qiyun Yang, Boyi Subinuer, Yilamujiang Gong, Hui Zulipikaer, Abudureherman Xu, Jingran Zhong, Xuemei Ren, Jiangtao Zou, Xiaoguang |
author_facet | Li, Li Ayiguli, Alimu Luan, Qiyun Yang, Boyi Subinuer, Yilamujiang Gong, Hui Zulipikaer, Abudureherman Xu, Jingran Zhong, Xuemei Ren, Jiangtao Zou, Xiaoguang |
author_sort | Li, Li |
collection | PubMed |
description | OBJECTIVE: Based on the respiratory disease big data platform in southern Xinjiang, we established a model that predicted and diagnosed chronic obstructive pulmonary disease, bronchiectasis, pulmonary embolism and pulmonary tuberculosis, and provided assistance for primary physicians. METHODS: The method combined convolutional neural network (CNN) and long-short-term memory network (LSTM) for prediction and diagnosis of respiratory diseases. We collected the medical records of inpatients in the respiratory department, including: chief complaint, history of present illness, and chest computed tomography. Pre-processing of clinical records with “jieba” word segmentation module, and the Bidirectional Encoder Representation from Transformers (BERT) model was used to perform word vectorization on the text. The partial and total information of the fused feature set was encoded by convolutional layers, while LSTM layers decoded the encoded information. RESULTS: The precisions of traditional machine-learning, deep-learning methods and our proposed method were 0.6, 0.81, 0.89, and F1 scores were 0.6, 0.81, 0.88, respectively. CONCLUSION: Compared with traditional machine learning and deep-learning methods that our proposed method had a significantly higher performance, and provided precise identification of respiratory disease. |
format | Online Article Text |
id | pubmed-9114643 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91146432022-05-19 Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods Li, Li Ayiguli, Alimu Luan, Qiyun Yang, Boyi Subinuer, Yilamujiang Gong, Hui Zulipikaer, Abudureherman Xu, Jingran Zhong, Xuemei Ren, Jiangtao Zou, Xiaoguang Front Public Health Public Health OBJECTIVE: Based on the respiratory disease big data platform in southern Xinjiang, we established a model that predicted and diagnosed chronic obstructive pulmonary disease, bronchiectasis, pulmonary embolism and pulmonary tuberculosis, and provided assistance for primary physicians. METHODS: The method combined convolutional neural network (CNN) and long-short-term memory network (LSTM) for prediction and diagnosis of respiratory diseases. We collected the medical records of inpatients in the respiratory department, including: chief complaint, history of present illness, and chest computed tomography. Pre-processing of clinical records with “jieba” word segmentation module, and the Bidirectional Encoder Representation from Transformers (BERT) model was used to perform word vectorization on the text. The partial and total information of the fused feature set was encoded by convolutional layers, while LSTM layers decoded the encoded information. RESULTS: The precisions of traditional machine-learning, deep-learning methods and our proposed method were 0.6, 0.81, 0.89, and F1 scores were 0.6, 0.81, 0.88, respectively. CONCLUSION: Compared with traditional machine learning and deep-learning methods that our proposed method had a significantly higher performance, and provided precise identification of respiratory disease. Frontiers Media S.A. 2022-05-04 /pmc/articles/PMC9114643/ /pubmed/35602136 http://dx.doi.org/10.3389/fpubh.2022.881234 Text en Copyright © 2022 Li, Ayiguli, Luan, Yang, Subinuer, Gong, Zulipikaer, Xu, Zhong, Ren and Zou. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Public Health Li, Li Ayiguli, Alimu Luan, Qiyun Yang, Boyi Subinuer, Yilamujiang Gong, Hui Zulipikaer, Abudureherman Xu, Jingran Zhong, Xuemei Ren, Jiangtao Zou, Xiaoguang Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods |
title | Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods |
title_full | Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods |
title_fullStr | Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods |
title_full_unstemmed | Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods |
title_short | Prediction and Diagnosis of Respiratory Disease by Combining Convolutional Neural Network and Bi-directional Long Short-Term Memory Methods |
title_sort | prediction and diagnosis of respiratory disease by combining convolutional neural network and bi-directional long short-term memory methods |
topic | Public Health |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9114643/ https://www.ncbi.nlm.nih.gov/pubmed/35602136 http://dx.doi.org/10.3389/fpubh.2022.881234 |
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