Cargando…
Characterization of the mitochondrial genome of parupeneus indicus (perciformes, mullidae)
Parupeneus indicus, a species in the family Mullidae, inhabits the coastal and inner lagoon reefs of the Indian and Pacific oceans. The mitochondrial genome of P. indicus is 16,566 base pairs in length and contains 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9116234/ https://www.ncbi.nlm.nih.gov/pubmed/35602335 http://dx.doi.org/10.1080/23802359.2022.2075287 |
_version_ | 1784710075978350592 |
---|---|
author | He, Xiongbo Luo, Zhisen Yi, Murong Yan, Yunrong |
author_facet | He, Xiongbo Luo, Zhisen Yi, Murong Yan, Yunrong |
author_sort | He, Xiongbo |
collection | PubMed |
description | Parupeneus indicus, a species in the family Mullidae, inhabits the coastal and inner lagoon reefs of the Indian and Pacific oceans. The mitochondrial genome of P. indicus is 16,566 base pairs in length and contains 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes, and a D-loop control region. The overall base composition is 26.58% A, 24.83% T, 30.39% C, and 18.19% G, indicating an AT-rich profile (51.41%). Phylogenetic analysis based on the 13 PCGs revealed a close evolutionary relationship between P. indicus and P. barberinus. The data obtained in this study represent a valuable mitogenomic resource for population studies in the family Mullidae and will contribute to gaining a better understanding of the conservation genetics and environmental DNA of these fish. |
format | Online Article Text |
id | pubmed-9116234 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-91162342022-05-19 Characterization of the mitochondrial genome of parupeneus indicus (perciformes, mullidae) He, Xiongbo Luo, Zhisen Yi, Murong Yan, Yunrong Mitochondrial DNA B Resour Mitogenome Announcement Parupeneus indicus, a species in the family Mullidae, inhabits the coastal and inner lagoon reefs of the Indian and Pacific oceans. The mitochondrial genome of P. indicus is 16,566 base pairs in length and contains 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes, and a D-loop control region. The overall base composition is 26.58% A, 24.83% T, 30.39% C, and 18.19% G, indicating an AT-rich profile (51.41%). Phylogenetic analysis based on the 13 PCGs revealed a close evolutionary relationship between P. indicus and P. barberinus. The data obtained in this study represent a valuable mitogenomic resource for population studies in the family Mullidae and will contribute to gaining a better understanding of the conservation genetics and environmental DNA of these fish. Taylor & Francis 2022-05-12 /pmc/articles/PMC9116234/ /pubmed/35602335 http://dx.doi.org/10.1080/23802359.2022.2075287 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement He, Xiongbo Luo, Zhisen Yi, Murong Yan, Yunrong Characterization of the mitochondrial genome of parupeneus indicus (perciformes, mullidae) |
title | Characterization of the mitochondrial genome of parupeneus indicus (perciformes, mullidae) |
title_full | Characterization of the mitochondrial genome of parupeneus indicus (perciformes, mullidae) |
title_fullStr | Characterization of the mitochondrial genome of parupeneus indicus (perciformes, mullidae) |
title_full_unstemmed | Characterization of the mitochondrial genome of parupeneus indicus (perciformes, mullidae) |
title_short | Characterization of the mitochondrial genome of parupeneus indicus (perciformes, mullidae) |
title_sort | characterization of the mitochondrial genome of parupeneus indicus (perciformes, mullidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9116234/ https://www.ncbi.nlm.nih.gov/pubmed/35602335 http://dx.doi.org/10.1080/23802359.2022.2075287 |
work_keys_str_mv | AT hexiongbo characterizationofthemitochondrialgenomeofparupeneusindicusperciformesmullidae AT luozhisen characterizationofthemitochondrialgenomeofparupeneusindicusperciformesmullidae AT yimurong characterizationofthemitochondrialgenomeofparupeneusindicusperciformesmullidae AT yanyunrong characterizationofthemitochondrialgenomeofparupeneusindicusperciformesmullidae |