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Deep learning supports the differentiation of alcoholic and other-than-alcoholic cirrhosis based on MRI

Although CT and MRI are standard procedures in cirrhosis diagnosis, differentiation of etiology based on imaging is not established. This proof-of-concept study explores the potential of deep learning (DL) to support imaging-based differentiation of the etiology of liver cirrhosis. This retrospectiv...

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Autores principales: Luetkens, Julian A., Nowak, Sebastian, Mesropyan, Narine, Block, Wolfgang, Praktiknjo, Michael, Chang, Johannes, Bauckhage, Christian, Sifa, Rafet, Sprinkart, Alois Martin, Faron, Anton, Attenberger, Ulrike
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9117223/
https://www.ncbi.nlm.nih.gov/pubmed/35585118
http://dx.doi.org/10.1038/s41598-022-12410-2
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author Luetkens, Julian A.
Nowak, Sebastian
Mesropyan, Narine
Block, Wolfgang
Praktiknjo, Michael
Chang, Johannes
Bauckhage, Christian
Sifa, Rafet
Sprinkart, Alois Martin
Faron, Anton
Attenberger, Ulrike
author_facet Luetkens, Julian A.
Nowak, Sebastian
Mesropyan, Narine
Block, Wolfgang
Praktiknjo, Michael
Chang, Johannes
Bauckhage, Christian
Sifa, Rafet
Sprinkart, Alois Martin
Faron, Anton
Attenberger, Ulrike
author_sort Luetkens, Julian A.
collection PubMed
description Although CT and MRI are standard procedures in cirrhosis diagnosis, differentiation of etiology based on imaging is not established. This proof-of-concept study explores the potential of deep learning (DL) to support imaging-based differentiation of the etiology of liver cirrhosis. This retrospective, monocentric study included 465 patients with confirmed diagnosis of (a) alcoholic (n = 221) and (b) other-than-alcoholic (n = 244) cirrhosis. Standard T2-weighted single-slice images at the caudate lobe level were randomly split for training with fivefold cross-validation (85%) and testing (15%), balanced for (a) and (b). After automated upstream liver segmentation, two different ImageNet pre-trained convolutional neural network (CNN) architectures (ResNet50, DenseNet121) were evaluated for classification of alcohol-related versus non-alcohol-related cirrhosis. The highest classification performance on test data was observed for ResNet50 with unfrozen pre-trained parameters, yielding an area under the receiver operating characteristic curve of 0.82 (95% confidence interval (CI) 0.71–0.91) and an accuracy of 0.75 (95% CI 0.64–0.85). An ensemble of both models did not lead to significant improvement in classification performance. This proof-of-principle study shows that deep-learning classifiers have the potential to aid in discriminating liver cirrhosis etiology based on standard MRI.
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spelling pubmed-91172232022-05-20 Deep learning supports the differentiation of alcoholic and other-than-alcoholic cirrhosis based on MRI Luetkens, Julian A. Nowak, Sebastian Mesropyan, Narine Block, Wolfgang Praktiknjo, Michael Chang, Johannes Bauckhage, Christian Sifa, Rafet Sprinkart, Alois Martin Faron, Anton Attenberger, Ulrike Sci Rep Article Although CT and MRI are standard procedures in cirrhosis diagnosis, differentiation of etiology based on imaging is not established. This proof-of-concept study explores the potential of deep learning (DL) to support imaging-based differentiation of the etiology of liver cirrhosis. This retrospective, monocentric study included 465 patients with confirmed diagnosis of (a) alcoholic (n = 221) and (b) other-than-alcoholic (n = 244) cirrhosis. Standard T2-weighted single-slice images at the caudate lobe level were randomly split for training with fivefold cross-validation (85%) and testing (15%), balanced for (a) and (b). After automated upstream liver segmentation, two different ImageNet pre-trained convolutional neural network (CNN) architectures (ResNet50, DenseNet121) were evaluated for classification of alcohol-related versus non-alcohol-related cirrhosis. The highest classification performance on test data was observed for ResNet50 with unfrozen pre-trained parameters, yielding an area under the receiver operating characteristic curve of 0.82 (95% confidence interval (CI) 0.71–0.91) and an accuracy of 0.75 (95% CI 0.64–0.85). An ensemble of both models did not lead to significant improvement in classification performance. This proof-of-principle study shows that deep-learning classifiers have the potential to aid in discriminating liver cirrhosis etiology based on standard MRI. Nature Publishing Group UK 2022-05-18 /pmc/articles/PMC9117223/ /pubmed/35585118 http://dx.doi.org/10.1038/s41598-022-12410-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Luetkens, Julian A.
Nowak, Sebastian
Mesropyan, Narine
Block, Wolfgang
Praktiknjo, Michael
Chang, Johannes
Bauckhage, Christian
Sifa, Rafet
Sprinkart, Alois Martin
Faron, Anton
Attenberger, Ulrike
Deep learning supports the differentiation of alcoholic and other-than-alcoholic cirrhosis based on MRI
title Deep learning supports the differentiation of alcoholic and other-than-alcoholic cirrhosis based on MRI
title_full Deep learning supports the differentiation of alcoholic and other-than-alcoholic cirrhosis based on MRI
title_fullStr Deep learning supports the differentiation of alcoholic and other-than-alcoholic cirrhosis based on MRI
title_full_unstemmed Deep learning supports the differentiation of alcoholic and other-than-alcoholic cirrhosis based on MRI
title_short Deep learning supports the differentiation of alcoholic and other-than-alcoholic cirrhosis based on MRI
title_sort deep learning supports the differentiation of alcoholic and other-than-alcoholic cirrhosis based on mri
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9117223/
https://www.ncbi.nlm.nih.gov/pubmed/35585118
http://dx.doi.org/10.1038/s41598-022-12410-2
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