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Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells
Metabolites are not only substrates in metabolic reactions, but they also serve as signaling molecules to regulate diverse biological functions. Identification of the binding proteins for the metabolites helps in the understanding of their functions beyond the classic metabolic pathways in which the...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9117919/ https://www.ncbi.nlm.nih.gov/pubmed/35600928 http://dx.doi.org/10.1016/j.xpro.2022.101385 |
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author | Hsu, Che-Chia Xu, Zhi-Gang Lei, Jie Chen, Zhong-Zhu Li, Hong-Yu Lin, Hui-Kuan |
author_facet | Hsu, Che-Chia Xu, Zhi-Gang Lei, Jie Chen, Zhong-Zhu Li, Hong-Yu Lin, Hui-Kuan |
author_sort | Hsu, Che-Chia |
collection | PubMed |
description | Metabolites are not only substrates in metabolic reactions, but they also serve as signaling molecules to regulate diverse biological functions. Identification of the binding proteins for the metabolites helps in the understanding of their functions beyond the classic metabolic pathways in which they are involved. We provide the protocol for synthesizing the biotin-labeled myo-inositol, which is used to identify its binding proteins by using biotin pull-down assay, given there is no available tool for the rapid screening of inositol-binding proteins in cells and in vitro systems. Biotin-labeled inositol probe therefore provides a tool to identify inositol’s sensors. For complete details on the use and execution of this protocol, please refer to Hsu et al. (2021). |
format | Online Article Text |
id | pubmed-9117919 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-91179192022-05-20 Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells Hsu, Che-Chia Xu, Zhi-Gang Lei, Jie Chen, Zhong-Zhu Li, Hong-Yu Lin, Hui-Kuan STAR Protoc Protocol Metabolites are not only substrates in metabolic reactions, but they also serve as signaling molecules to regulate diverse biological functions. Identification of the binding proteins for the metabolites helps in the understanding of their functions beyond the classic metabolic pathways in which they are involved. We provide the protocol for synthesizing the biotin-labeled myo-inositol, which is used to identify its binding proteins by using biotin pull-down assay, given there is no available tool for the rapid screening of inositol-binding proteins in cells and in vitro systems. Biotin-labeled inositol probe therefore provides a tool to identify inositol’s sensors. For complete details on the use and execution of this protocol, please refer to Hsu et al. (2021). Elsevier 2022-05-14 /pmc/articles/PMC9117919/ /pubmed/35600928 http://dx.doi.org/10.1016/j.xpro.2022.101385 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Protocol Hsu, Che-Chia Xu, Zhi-Gang Lei, Jie Chen, Zhong-Zhu Li, Hong-Yu Lin, Hui-Kuan Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells |
title | Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells |
title_full | Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells |
title_fullStr | Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells |
title_full_unstemmed | Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells |
title_short | Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells |
title_sort | identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells |
topic | Protocol |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9117919/ https://www.ncbi.nlm.nih.gov/pubmed/35600928 http://dx.doi.org/10.1016/j.xpro.2022.101385 |
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