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Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells

Metabolites are not only substrates in metabolic reactions, but they also serve as signaling molecules to regulate diverse biological functions. Identification of the binding proteins for the metabolites helps in the understanding of their functions beyond the classic metabolic pathways in which the...

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Detalles Bibliográficos
Autores principales: Hsu, Che-Chia, Xu, Zhi-Gang, Lei, Jie, Chen, Zhong-Zhu, Li, Hong-Yu, Lin, Hui-Kuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9117919/
https://www.ncbi.nlm.nih.gov/pubmed/35600928
http://dx.doi.org/10.1016/j.xpro.2022.101385
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author Hsu, Che-Chia
Xu, Zhi-Gang
Lei, Jie
Chen, Zhong-Zhu
Li, Hong-Yu
Lin, Hui-Kuan
author_facet Hsu, Che-Chia
Xu, Zhi-Gang
Lei, Jie
Chen, Zhong-Zhu
Li, Hong-Yu
Lin, Hui-Kuan
author_sort Hsu, Che-Chia
collection PubMed
description Metabolites are not only substrates in metabolic reactions, but they also serve as signaling molecules to regulate diverse biological functions. Identification of the binding proteins for the metabolites helps in the understanding of their functions beyond the classic metabolic pathways in which they are involved. We provide the protocol for synthesizing the biotin-labeled myo-inositol, which is used to identify its binding proteins by using biotin pull-down assay, given there is no available tool for the rapid screening of inositol-binding proteins in cells and in vitro systems. Biotin-labeled inositol probe therefore provides a tool to identify inositol’s sensors. For complete details on the use and execution of this protocol, please refer to Hsu et al. (2021).
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spelling pubmed-91179192022-05-20 Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells Hsu, Che-Chia Xu, Zhi-Gang Lei, Jie Chen, Zhong-Zhu Li, Hong-Yu Lin, Hui-Kuan STAR Protoc Protocol Metabolites are not only substrates in metabolic reactions, but they also serve as signaling molecules to regulate diverse biological functions. Identification of the binding proteins for the metabolites helps in the understanding of their functions beyond the classic metabolic pathways in which they are involved. We provide the protocol for synthesizing the biotin-labeled myo-inositol, which is used to identify its binding proteins by using biotin pull-down assay, given there is no available tool for the rapid screening of inositol-binding proteins in cells and in vitro systems. Biotin-labeled inositol probe therefore provides a tool to identify inositol’s sensors. For complete details on the use and execution of this protocol, please refer to Hsu et al. (2021). Elsevier 2022-05-14 /pmc/articles/PMC9117919/ /pubmed/35600928 http://dx.doi.org/10.1016/j.xpro.2022.101385 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Protocol
Hsu, Che-Chia
Xu, Zhi-Gang
Lei, Jie
Chen, Zhong-Zhu
Li, Hong-Yu
Lin, Hui-Kuan
Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells
title Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells
title_full Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells
title_fullStr Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells
title_full_unstemmed Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells
title_short Identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells
title_sort identification of myo-inositol-binding proteins by using the biotin pull-down strategy in cultured cells
topic Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9117919/
https://www.ncbi.nlm.nih.gov/pubmed/35600928
http://dx.doi.org/10.1016/j.xpro.2022.101385
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