Cargando…
Draft Genome Sequence of a Novel Iflavirus from Leafhoppers (Exitianus capicola) in Iraq
The draft genome sequence of a novel virus was determined from a leafhopper insect (Exitianus capicola) via transcriptomic sequencing and rapid amplification of cDNA ends. Results of the sequence alignment suggested that the new virus is a member of the genus Iflavirus, family Iflaviridae. Thus, it...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Microbiology
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9119122/ https://www.ncbi.nlm.nih.gov/pubmed/35435741 http://dx.doi.org/10.1128/mra.00108-22 |
_version_ | 1784710640287350784 |
---|---|
author | Ye, Zhuang-Xin Lahuf, Adnan A. Salman, Mohammed D. Zhang, Yan Li, Jun-Min |
author_facet | Ye, Zhuang-Xin Lahuf, Adnan A. Salman, Mohammed D. Zhang, Yan Li, Jun-Min |
author_sort | Ye, Zhuang-Xin |
collection | PubMed |
description | The draft genome sequence of a novel virus was determined from a leafhopper insect (Exitianus capicola) via transcriptomic sequencing and rapid amplification of cDNA ends. Results of the sequence alignment suggested that the new virus is a member of the genus Iflavirus, family Iflaviridae. Thus, it was proposed to be named Exitianus capicola iflavirus 2 (ECIV2). ECIV2 has a single positive-strand RNA genome of 7,821 nucleotides [excluding the poly(A) tail] containing a single open reading frame (ORF) with typical iflavirus conserved domains, including a picornavirus capsid protein-like domain, a cricket paralysis virus capsid-like domain, a helicase, a peptidase, and an RNA-dependent RNA polymerase domain. |
format | Online Article Text |
id | pubmed-9119122 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Society for Microbiology |
record_format | MEDLINE/PubMed |
spelling | pubmed-91191222022-05-20 Draft Genome Sequence of a Novel Iflavirus from Leafhoppers (Exitianus capicola) in Iraq Ye, Zhuang-Xin Lahuf, Adnan A. Salman, Mohammed D. Zhang, Yan Li, Jun-Min Microbiol Resour Announc Genome Sequences The draft genome sequence of a novel virus was determined from a leafhopper insect (Exitianus capicola) via transcriptomic sequencing and rapid amplification of cDNA ends. Results of the sequence alignment suggested that the new virus is a member of the genus Iflavirus, family Iflaviridae. Thus, it was proposed to be named Exitianus capicola iflavirus 2 (ECIV2). ECIV2 has a single positive-strand RNA genome of 7,821 nucleotides [excluding the poly(A) tail] containing a single open reading frame (ORF) with typical iflavirus conserved domains, including a picornavirus capsid protein-like domain, a cricket paralysis virus capsid-like domain, a helicase, a peptidase, and an RNA-dependent RNA polymerase domain. American Society for Microbiology 2022-04-18 /pmc/articles/PMC9119122/ /pubmed/35435741 http://dx.doi.org/10.1128/mra.00108-22 Text en Copyright © 2022 Ye et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Genome Sequences Ye, Zhuang-Xin Lahuf, Adnan A. Salman, Mohammed D. Zhang, Yan Li, Jun-Min Draft Genome Sequence of a Novel Iflavirus from Leafhoppers (Exitianus capicola) in Iraq |
title | Draft Genome Sequence of a Novel Iflavirus from Leafhoppers (Exitianus capicola) in Iraq |
title_full | Draft Genome Sequence of a Novel Iflavirus from Leafhoppers (Exitianus capicola) in Iraq |
title_fullStr | Draft Genome Sequence of a Novel Iflavirus from Leafhoppers (Exitianus capicola) in Iraq |
title_full_unstemmed | Draft Genome Sequence of a Novel Iflavirus from Leafhoppers (Exitianus capicola) in Iraq |
title_short | Draft Genome Sequence of a Novel Iflavirus from Leafhoppers (Exitianus capicola) in Iraq |
title_sort | draft genome sequence of a novel iflavirus from leafhoppers (exitianus capicola) in iraq |
topic | Genome Sequences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9119122/ https://www.ncbi.nlm.nih.gov/pubmed/35435741 http://dx.doi.org/10.1128/mra.00108-22 |
work_keys_str_mv | AT yezhuangxin draftgenomesequenceofanoveliflavirusfromleafhoppersexitianuscapicolainiraq AT lahufadnana draftgenomesequenceofanoveliflavirusfromleafhoppersexitianuscapicolainiraq AT salmanmohammedd draftgenomesequenceofanoveliflavirusfromleafhoppersexitianuscapicolainiraq AT zhangyan draftgenomesequenceofanoveliflavirusfromleafhoppersexitianuscapicolainiraq AT lijunmin draftgenomesequenceofanoveliflavirusfromleafhoppersexitianuscapicolainiraq |