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Concept development of an on-chip PET system
BACKGROUND: Organs-on-Chips (OOCs), microdevices mimicking in vivo organs, find growing applications in disease modeling and drug discovery. With the increasing number of uses comes a strong demand for imaging capabilities of OOCs as monitoring physiologic processes within OOCs is vital for the cont...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9120309/ https://www.ncbi.nlm.nih.gov/pubmed/35588024 http://dx.doi.org/10.1186/s40658-022-00467-x |
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author | Clement, Christoph Birindelli, Gabriele Pizzichemi, Marco Pagano, Fiammetta Kruithof-De Julio, Marianna Ziegler, Sibylle Rominger, Axel Auffray, Etiennette Shi, Kuangyu |
author_facet | Clement, Christoph Birindelli, Gabriele Pizzichemi, Marco Pagano, Fiammetta Kruithof-De Julio, Marianna Ziegler, Sibylle Rominger, Axel Auffray, Etiennette Shi, Kuangyu |
author_sort | Clement, Christoph |
collection | PubMed |
description | BACKGROUND: Organs-on-Chips (OOCs), microdevices mimicking in vivo organs, find growing applications in disease modeling and drug discovery. With the increasing number of uses comes a strong demand for imaging capabilities of OOCs as monitoring physiologic processes within OOCs is vital for the continuous improvement of this technology. Positron Emission Tomography (PET) would be ideal for OOC imaging, however, current PET systems are insufficient for this task due to their inadequate spatial resolution. In this work, we propose the concept of an On-Chip PET system capable of imaging OOCs and optimize its design using a Monte Carlo Simulation (MCS). MATERIAL AND METHODS: The proposed system consists of four detectors arranged around the OOC device. Each detector is made of two monolithic LYSO crystals and covered with Silicon photomultipliers (SiPMs) on multiple surfaces. We use a Convolutional Neural Network (CNN) trained with data from a MCS to predict the first gamma-ray interaction position inside the detector from the light patterns that are recorded by the SiPMs on the detector’s surfaces. RESULTS: The CNN achieves a mean average prediction error of 0.80 mm in the best configuration. The proposed system achieves a sensitivity of 34.81% for 13 mm thick crystals and does not show a prediction degradation near the boundaries of the detector. We use the trained network to reconstruct an image of a grid of 21 point sources spread across the field-of-view and obtain a mean spatial resolution of 0.55 mm. We show that 25,000 Line of Responses (LORs) are needed to reconstruct a realistic OOC phantom with adequate image quality. CONCLUSIONS: We demonstrate that it is possible to achieve a spatial resolution of almost 0.5 mm in a PET system made of multiple monolithic LYSO crystals by directly predicting the scintillation position from light patterns created with SiPMs. We observe that a thinner crystal performs better than a thicker one, that increasing the SiPM size from 3 mm to 6 mm only slightly decreases the prediction performance, and that certain surfaces encode significantly more information for the scintillation-point prediction than others. |
format | Online Article Text |
id | pubmed-9120309 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-91203092022-05-21 Concept development of an on-chip PET system Clement, Christoph Birindelli, Gabriele Pizzichemi, Marco Pagano, Fiammetta Kruithof-De Julio, Marianna Ziegler, Sibylle Rominger, Axel Auffray, Etiennette Shi, Kuangyu EJNMMI Phys Original Research BACKGROUND: Organs-on-Chips (OOCs), microdevices mimicking in vivo organs, find growing applications in disease modeling and drug discovery. With the increasing number of uses comes a strong demand for imaging capabilities of OOCs as monitoring physiologic processes within OOCs is vital for the continuous improvement of this technology. Positron Emission Tomography (PET) would be ideal for OOC imaging, however, current PET systems are insufficient for this task due to their inadequate spatial resolution. In this work, we propose the concept of an On-Chip PET system capable of imaging OOCs and optimize its design using a Monte Carlo Simulation (MCS). MATERIAL AND METHODS: The proposed system consists of four detectors arranged around the OOC device. Each detector is made of two monolithic LYSO crystals and covered with Silicon photomultipliers (SiPMs) on multiple surfaces. We use a Convolutional Neural Network (CNN) trained with data from a MCS to predict the first gamma-ray interaction position inside the detector from the light patterns that are recorded by the SiPMs on the detector’s surfaces. RESULTS: The CNN achieves a mean average prediction error of 0.80 mm in the best configuration. The proposed system achieves a sensitivity of 34.81% for 13 mm thick crystals and does not show a prediction degradation near the boundaries of the detector. We use the trained network to reconstruct an image of a grid of 21 point sources spread across the field-of-view and obtain a mean spatial resolution of 0.55 mm. We show that 25,000 Line of Responses (LORs) are needed to reconstruct a realistic OOC phantom with adequate image quality. CONCLUSIONS: We demonstrate that it is possible to achieve a spatial resolution of almost 0.5 mm in a PET system made of multiple monolithic LYSO crystals by directly predicting the scintillation position from light patterns created with SiPMs. We observe that a thinner crystal performs better than a thicker one, that increasing the SiPM size from 3 mm to 6 mm only slightly decreases the prediction performance, and that certain surfaces encode significantly more information for the scintillation-point prediction than others. Springer International Publishing 2022-05-19 /pmc/articles/PMC9120309/ /pubmed/35588024 http://dx.doi.org/10.1186/s40658-022-00467-x Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Research Clement, Christoph Birindelli, Gabriele Pizzichemi, Marco Pagano, Fiammetta Kruithof-De Julio, Marianna Ziegler, Sibylle Rominger, Axel Auffray, Etiennette Shi, Kuangyu Concept development of an on-chip PET system |
title | Concept development of an on-chip PET system |
title_full | Concept development of an on-chip PET system |
title_fullStr | Concept development of an on-chip PET system |
title_full_unstemmed | Concept development of an on-chip PET system |
title_short | Concept development of an on-chip PET system |
title_sort | concept development of an on-chip pet system |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9120309/ https://www.ncbi.nlm.nih.gov/pubmed/35588024 http://dx.doi.org/10.1186/s40658-022-00467-x |
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