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A novel early diagnostic framework for chronic diseases with class imbalance
Chronic diseases are one of the most severe health issues in the world, due to their terrible clinical presentations such as long onset cycle, insidious symptoms, and various complications. Recently, machine learning has become a promising technique to assist the early diagnosis of chronic diseases....
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9123399/ https://www.ncbi.nlm.nih.gov/pubmed/35597855 http://dx.doi.org/10.1038/s41598-022-12574-x |
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author | Yuan, Xiaohan Chen, Shuyu Sun, Chuan Yuwen, Lu |
author_facet | Yuan, Xiaohan Chen, Shuyu Sun, Chuan Yuwen, Lu |
author_sort | Yuan, Xiaohan |
collection | PubMed |
description | Chronic diseases are one of the most severe health issues in the world, due to their terrible clinical presentations such as long onset cycle, insidious symptoms, and various complications. Recently, machine learning has become a promising technique to assist the early diagnosis of chronic diseases. However, existing works ignore the problems of feature hiding and imbalanced class distribution in chronic disease datasets. In this paper, we present a universal and efficient diagnostic framework to alleviate the above two problems for diagnosing chronic diseases timely and accurately. Specifically, we first propose a network-limited polynomial neural network (NLPNN) algorithm to efficiently capture high-level features hidden in chronic disease datasets, which is data augmentation in terms of its feature space and can also avoid over-fitting. Then, to alleviate the class imbalance problem, we further propose an attention-empowered NLPNN algorithm to improve the diagnostic accuracy for sick cases, which is also data augmentation in terms of its sample space. We evaluate the proposed framework on nine public and two real chronic disease datasets (partly with class imbalance). Extensive experiment results demonstrate that the proposed diagnostic algorithms outperform state-of-the-art machine learning algorithms, and can achieve superior performances in terms of accuracy, recall, F1, and G_mean. The proposed framework can help to diagnose chronic diseases timely and accurately at an early stage. |
format | Online Article Text |
id | pubmed-9123399 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-91233992022-05-21 A novel early diagnostic framework for chronic diseases with class imbalance Yuan, Xiaohan Chen, Shuyu Sun, Chuan Yuwen, Lu Sci Rep Article Chronic diseases are one of the most severe health issues in the world, due to their terrible clinical presentations such as long onset cycle, insidious symptoms, and various complications. Recently, machine learning has become a promising technique to assist the early diagnosis of chronic diseases. However, existing works ignore the problems of feature hiding and imbalanced class distribution in chronic disease datasets. In this paper, we present a universal and efficient diagnostic framework to alleviate the above two problems for diagnosing chronic diseases timely and accurately. Specifically, we first propose a network-limited polynomial neural network (NLPNN) algorithm to efficiently capture high-level features hidden in chronic disease datasets, which is data augmentation in terms of its feature space and can also avoid over-fitting. Then, to alleviate the class imbalance problem, we further propose an attention-empowered NLPNN algorithm to improve the diagnostic accuracy for sick cases, which is also data augmentation in terms of its sample space. We evaluate the proposed framework on nine public and two real chronic disease datasets (partly with class imbalance). Extensive experiment results demonstrate that the proposed diagnostic algorithms outperform state-of-the-art machine learning algorithms, and can achieve superior performances in terms of accuracy, recall, F1, and G_mean. The proposed framework can help to diagnose chronic diseases timely and accurately at an early stage. Nature Publishing Group UK 2022-05-21 /pmc/articles/PMC9123399/ /pubmed/35597855 http://dx.doi.org/10.1038/s41598-022-12574-x Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Yuan, Xiaohan Chen, Shuyu Sun, Chuan Yuwen, Lu A novel early diagnostic framework for chronic diseases with class imbalance |
title | A novel early diagnostic framework for chronic diseases with class imbalance |
title_full | A novel early diagnostic framework for chronic diseases with class imbalance |
title_fullStr | A novel early diagnostic framework for chronic diseases with class imbalance |
title_full_unstemmed | A novel early diagnostic framework for chronic diseases with class imbalance |
title_short | A novel early diagnostic framework for chronic diseases with class imbalance |
title_sort | novel early diagnostic framework for chronic diseases with class imbalance |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9123399/ https://www.ncbi.nlm.nih.gov/pubmed/35597855 http://dx.doi.org/10.1038/s41598-022-12574-x |
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