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Introducing critical common dysregulated proteins in esophageal, gastric, and intestinal cancers
AIM: The current study aimed to determine the common dysregulated proteins between esophageal, gastric, and intestinal cancers. BACKGROUND: Though there are several documents about the role of AKT1 in promoting of esophageal, gastric, and intestinal cancers, there is not enough evidence about the do...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Shaheed Beheshti University of Medical Sciences
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9123629/ https://www.ncbi.nlm.nih.gov/pubmed/35611247 |
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author | Arjmand, Babak Razzaghi, Mohammadreza Rezaei Tavirani, Mostafa Rostami-Nejad, Mohammad Rezaei Tavirani, Majid Vafaee, Reza |
author_facet | Arjmand, Babak Razzaghi, Mohammadreza Rezaei Tavirani, Mostafa Rostami-Nejad, Mohammad Rezaei Tavirani, Majid Vafaee, Reza |
author_sort | Arjmand, Babak |
collection | PubMed |
description | AIM: The current study aimed to determine the common dysregulated proteins between esophageal, gastric, and intestinal cancers. BACKGROUND: Though there are several documents about the role of AKT1 in promoting of esophageal, gastric, and intestinal cancers, there is not enough evidence about the dominant role of AKT1 relative to the other oncogene genes in the promotion of the three studied cancer types. METHODS: One hundred proteins related to each of esophageal, gastric, or intestinal cancer were retrieved from the STRING database and interacted by Cytoscape software v 3.2.7. 2 to create the correlated interactomes. The network was analyzed by the “NetworkAnalyzer” application of Cytoscape to find the centrality parameters of the nodes. Results of network analysis and action map assessment were used to determine the common critical proteins between the three studied cancers. RESULTS: One hundred proteins were extracted for each of the studied cancers. Among 42 common dysregulated proteins, 36 individuals were selected through network analysis and were screened through action map assessment. Eighteen proteins were introduced as the important common proteins. Finally, AKT1 was a candidate for the crucial dysregulated proteins common in the three analyzed diseases. CONCLUSION: The findings indicate that AKT1, relative to the other oncogene genes, is a suitable candidate to be evaluated in patients as a prediagnostic tool to reduce endoscopy and colonoscopy rates. |
format | Online Article Text |
id | pubmed-9123629 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Shaheed Beheshti University of Medical Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-91236292022-05-23 Introducing critical common dysregulated proteins in esophageal, gastric, and intestinal cancers Arjmand, Babak Razzaghi, Mohammadreza Rezaei Tavirani, Mostafa Rostami-Nejad, Mohammad Rezaei Tavirani, Majid Vafaee, Reza Gastroenterol Hepatol Bed Bench Original Article AIM: The current study aimed to determine the common dysregulated proteins between esophageal, gastric, and intestinal cancers. BACKGROUND: Though there are several documents about the role of AKT1 in promoting of esophageal, gastric, and intestinal cancers, there is not enough evidence about the dominant role of AKT1 relative to the other oncogene genes in the promotion of the three studied cancer types. METHODS: One hundred proteins related to each of esophageal, gastric, or intestinal cancer were retrieved from the STRING database and interacted by Cytoscape software v 3.2.7. 2 to create the correlated interactomes. The network was analyzed by the “NetworkAnalyzer” application of Cytoscape to find the centrality parameters of the nodes. Results of network analysis and action map assessment were used to determine the common critical proteins between the three studied cancers. RESULTS: One hundred proteins were extracted for each of the studied cancers. Among 42 common dysregulated proteins, 36 individuals were selected through network analysis and were screened through action map assessment. Eighteen proteins were introduced as the important common proteins. Finally, AKT1 was a candidate for the crucial dysregulated proteins common in the three analyzed diseases. CONCLUSION: The findings indicate that AKT1, relative to the other oncogene genes, is a suitable candidate to be evaluated in patients as a prediagnostic tool to reduce endoscopy and colonoscopy rates. Shaheed Beheshti University of Medical Sciences 2022 /pmc/articles/PMC9123629/ /pubmed/35611247 Text en ©2022 RIGLD, Research Institute for Gastroenterology and Liver Diseases https://creativecommons.org/licenses/by/3.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/ (https://creativecommons.org/licenses/by/3.0/) ) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Arjmand, Babak Razzaghi, Mohammadreza Rezaei Tavirani, Mostafa Rostami-Nejad, Mohammad Rezaei Tavirani, Majid Vafaee, Reza Introducing critical common dysregulated proteins in esophageal, gastric, and intestinal cancers |
title | Introducing critical common dysregulated proteins in esophageal, gastric, and intestinal cancers |
title_full | Introducing critical common dysregulated proteins in esophageal, gastric, and intestinal cancers |
title_fullStr | Introducing critical common dysregulated proteins in esophageal, gastric, and intestinal cancers |
title_full_unstemmed | Introducing critical common dysregulated proteins in esophageal, gastric, and intestinal cancers |
title_short | Introducing critical common dysregulated proteins in esophageal, gastric, and intestinal cancers |
title_sort | introducing critical common dysregulated proteins in esophageal, gastric, and intestinal cancers |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9123629/ https://www.ncbi.nlm.nih.gov/pubmed/35611247 |
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