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Protometabolism as out-of-equilibrium chemistry

It is common to compare life with machines. Both consume fuel and release waste to run. In biology, the engine that drives the living system is referred to as metabolism. However, attempts at deciphering the origins of metabolism do not focus on this energetic relationship that sustains life but rat...

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Detalles Bibliográficos
Autores principales: Nader, Serge, Sebastianelli, Lorenzo, Mansy, Sheref S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9125230/
https://www.ncbi.nlm.nih.gov/pubmed/35599565
http://dx.doi.org/10.1098/rsta.2020.0423
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author Nader, Serge
Sebastianelli, Lorenzo
Mansy, Sheref S.
author_facet Nader, Serge
Sebastianelli, Lorenzo
Mansy, Sheref S.
author_sort Nader, Serge
collection PubMed
description It is common to compare life with machines. Both consume fuel and release waste to run. In biology, the engine that drives the living system is referred to as metabolism. However, attempts at deciphering the origins of metabolism do not focus on this energetic relationship that sustains life but rather concentrate on nonenzymatic reactions that produce all the intermediates of an extant metabolic pathway. Such an approach is akin to studying the molecules produced from the burning of coal instead of deciphering how the released energy drives the movement of pistons and ultimately the train when investigating the mechanisms behind locomotion. Theories that do explicitly invoke geological chemical gradients to drive metabolism most frequently feature hydrothermal vent conditions, but hydrothermal vents are not the only regions of the early Earth that could have provided the fuel necessary to sustain the Earth's first (proto)cells. Here, we give examples of prior reports on protometabolism and highlight how more recent investigations of out-of-equilibrium systems may point to alternative scenarios more consistent with the majority of prebiotic chemistry data accumulated thus far. This article is part of the theme issue ‘Emergent phenomena in complex physical and socio-technical systems: from cells to societies’.
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spelling pubmed-91252302022-05-27 Protometabolism as out-of-equilibrium chemistry Nader, Serge Sebastianelli, Lorenzo Mansy, Sheref S. Philos Trans A Math Phys Eng Sci Articles It is common to compare life with machines. Both consume fuel and release waste to run. In biology, the engine that drives the living system is referred to as metabolism. However, attempts at deciphering the origins of metabolism do not focus on this energetic relationship that sustains life but rather concentrate on nonenzymatic reactions that produce all the intermediates of an extant metabolic pathway. Such an approach is akin to studying the molecules produced from the burning of coal instead of deciphering how the released energy drives the movement of pistons and ultimately the train when investigating the mechanisms behind locomotion. Theories that do explicitly invoke geological chemical gradients to drive metabolism most frequently feature hydrothermal vent conditions, but hydrothermal vents are not the only regions of the early Earth that could have provided the fuel necessary to sustain the Earth's first (proto)cells. Here, we give examples of prior reports on protometabolism and highlight how more recent investigations of out-of-equilibrium systems may point to alternative scenarios more consistent with the majority of prebiotic chemistry data accumulated thus far. This article is part of the theme issue ‘Emergent phenomena in complex physical and socio-technical systems: from cells to societies’. The Royal Society 2022-07-11 2022-05-23 /pmc/articles/PMC9125230/ /pubmed/35599565 http://dx.doi.org/10.1098/rsta.2020.0423 Text en © 2022 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited.
spellingShingle Articles
Nader, Serge
Sebastianelli, Lorenzo
Mansy, Sheref S.
Protometabolism as out-of-equilibrium chemistry
title Protometabolism as out-of-equilibrium chemistry
title_full Protometabolism as out-of-equilibrium chemistry
title_fullStr Protometabolism as out-of-equilibrium chemistry
title_full_unstemmed Protometabolism as out-of-equilibrium chemistry
title_short Protometabolism as out-of-equilibrium chemistry
title_sort protometabolism as out-of-equilibrium chemistry
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9125230/
https://www.ncbi.nlm.nih.gov/pubmed/35599565
http://dx.doi.org/10.1098/rsta.2020.0423
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