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A Distinct Glucose Metabolism Signature of Lung Adenocarcinoma With Prognostic Value

Background: Lung adenocarcinoma (LUAD) remains the most common type of lung cancer and is the main cause of cancer-related death worldwide. Reprogramming of glucose metabolism plays a crucial role in tumorigenesis and progression. However, the regulation of glucose metabolism is still being explored...

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Autores principales: Li, Ding, Liang, Jiaming, Zhang, Wenzhou, Wu, Xuan, Fan, Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9125243/
https://www.ncbi.nlm.nih.gov/pubmed/35615380
http://dx.doi.org/10.3389/fgene.2022.860677
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author Li, Ding
Liang, Jiaming
Zhang, Wenzhou
Wu, Xuan
Fan, Jie
author_facet Li, Ding
Liang, Jiaming
Zhang, Wenzhou
Wu, Xuan
Fan, Jie
author_sort Li, Ding
collection PubMed
description Background: Lung adenocarcinoma (LUAD) remains the most common type of lung cancer and is the main cause of cancer-related death worldwide. Reprogramming of glucose metabolism plays a crucial role in tumorigenesis and progression. However, the regulation of glucose metabolism is still being explored in LUAD. Determining the underlying clinical value of glucose metabolism will contribute in increasing clinical interventions. Our study aimed to conduct a comprehensive analysis of the landscape of glucose metabolism-related genes in LUAD and develop a prognostic risk signature. Methods: We extracted the RNA-seq data and relevant clinical variants from The Cancer Genome Atlas (TCGA) database and identified glucose metabolism-related genes associated with the outcome by correlation analysis. To generate a prognostic signature, least absolute shrinkage and selection operator (LASSO) Cox regression analysis was performed. Results: Finally, ten genes with expression status were identified to generate the risk signature, including FBP2, ADH6, DHDH, PRKCB, INPP5J, ABAT, HK2, GNPNAT1, PLCB3, and ACAT2. Survival analysis indicated that the patients in the high-risk group had a worse survival than those in the low-risk group, which is consistent with the results in validated cohorts. And receiver operating characteristic (ROC) curve analysis further validated the prognostic value and predictive performance of the signature. In addition, the two risk groups had significantly different clinicopathological characteristics and immune cell infiltration status. Notably, the low-risk group is more likely to respond to immunotherapy. Conclusion: Overall, this study systematically explored the prognostic value of glucose metabolism and generated a prognostic risk signature with favorable efficacy and accuracy, which help select candidate patients and explore potential therapeutic approaches targeting the reprogrammed glucose metabolism in LUAD.
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spelling pubmed-91252432022-05-24 A Distinct Glucose Metabolism Signature of Lung Adenocarcinoma With Prognostic Value Li, Ding Liang, Jiaming Zhang, Wenzhou Wu, Xuan Fan, Jie Front Genet Genetics Background: Lung adenocarcinoma (LUAD) remains the most common type of lung cancer and is the main cause of cancer-related death worldwide. Reprogramming of glucose metabolism plays a crucial role in tumorigenesis and progression. However, the regulation of glucose metabolism is still being explored in LUAD. Determining the underlying clinical value of glucose metabolism will contribute in increasing clinical interventions. Our study aimed to conduct a comprehensive analysis of the landscape of glucose metabolism-related genes in LUAD and develop a prognostic risk signature. Methods: We extracted the RNA-seq data and relevant clinical variants from The Cancer Genome Atlas (TCGA) database and identified glucose metabolism-related genes associated with the outcome by correlation analysis. To generate a prognostic signature, least absolute shrinkage and selection operator (LASSO) Cox regression analysis was performed. Results: Finally, ten genes with expression status were identified to generate the risk signature, including FBP2, ADH6, DHDH, PRKCB, INPP5J, ABAT, HK2, GNPNAT1, PLCB3, and ACAT2. Survival analysis indicated that the patients in the high-risk group had a worse survival than those in the low-risk group, which is consistent with the results in validated cohorts. And receiver operating characteristic (ROC) curve analysis further validated the prognostic value and predictive performance of the signature. In addition, the two risk groups had significantly different clinicopathological characteristics and immune cell infiltration status. Notably, the low-risk group is more likely to respond to immunotherapy. Conclusion: Overall, this study systematically explored the prognostic value of glucose metabolism and generated a prognostic risk signature with favorable efficacy and accuracy, which help select candidate patients and explore potential therapeutic approaches targeting the reprogrammed glucose metabolism in LUAD. Frontiers Media S.A. 2022-05-09 /pmc/articles/PMC9125243/ /pubmed/35615380 http://dx.doi.org/10.3389/fgene.2022.860677 Text en Copyright © 2022 Li, Liang, Zhang, Wu and Fan. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Li, Ding
Liang, Jiaming
Zhang, Wenzhou
Wu, Xuan
Fan, Jie
A Distinct Glucose Metabolism Signature of Lung Adenocarcinoma With Prognostic Value
title A Distinct Glucose Metabolism Signature of Lung Adenocarcinoma With Prognostic Value
title_full A Distinct Glucose Metabolism Signature of Lung Adenocarcinoma With Prognostic Value
title_fullStr A Distinct Glucose Metabolism Signature of Lung Adenocarcinoma With Prognostic Value
title_full_unstemmed A Distinct Glucose Metabolism Signature of Lung Adenocarcinoma With Prognostic Value
title_short A Distinct Glucose Metabolism Signature of Lung Adenocarcinoma With Prognostic Value
title_sort distinct glucose metabolism signature of lung adenocarcinoma with prognostic value
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9125243/
https://www.ncbi.nlm.nih.gov/pubmed/35615380
http://dx.doi.org/10.3389/fgene.2022.860677
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