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The complete chloroplast genome of Bothriochloa ischaemum
Bothriochloa ischaemum (Linn.) 1936 is a high-quality perennial forage in Loess Plateau of China. In this study, we sequenced and characterized the complete chloroplast genome of B. ischaemum, which was a circular DNA of 138,316 bp in length, including a large single copy (LSC) region of 80,226 bp,...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9126563/ https://www.ncbi.nlm.nih.gov/pubmed/35614976 http://dx.doi.org/10.1080/23802359.2022.2073850 |
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author | Li, Yu-ying Xu, Hong-yu Zhong, Hua Yang, Zhi-qing Dong, Kuan-hu Xia, Fang-shan |
author_facet | Li, Yu-ying Xu, Hong-yu Zhong, Hua Yang, Zhi-qing Dong, Kuan-hu Xia, Fang-shan |
author_sort | Li, Yu-ying |
collection | PubMed |
description | Bothriochloa ischaemum (Linn.) 1936 is a high-quality perennial forage in Loess Plateau of China. In this study, we sequenced and characterized the complete chloroplast genome of B. ischaemum, which was a circular DNA of 138,316 bp in length, including a large single copy (LSC) region of 80,226 bp, a small single copy (SSC) region of 12,526 bp, and the circular DNA was separated by a pair of identical inverted repeat regions (IRs) of 22,782 bp each. A total of 134 genes were identified, including 87 protein-coding genes, 39 tRNA genes, and eight rRNA genes. Phylogenetic tree showed that B. ischaemum was closer to B. decipiens and B. alta, genus Bothriochloa was closely related to genus Pseudanthistiria. Our findings will be helpful for better understanding of genetic diversity of Bothriochloa plants. |
format | Online Article Text |
id | pubmed-9126563 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-91265632022-05-24 The complete chloroplast genome of Bothriochloa ischaemum Li, Yu-ying Xu, Hong-yu Zhong, Hua Yang, Zhi-qing Dong, Kuan-hu Xia, Fang-shan Mitochondrial DNA B Resour Plastome Announcement Bothriochloa ischaemum (Linn.) 1936 is a high-quality perennial forage in Loess Plateau of China. In this study, we sequenced and characterized the complete chloroplast genome of B. ischaemum, which was a circular DNA of 138,316 bp in length, including a large single copy (LSC) region of 80,226 bp, a small single copy (SSC) region of 12,526 bp, and the circular DNA was separated by a pair of identical inverted repeat regions (IRs) of 22,782 bp each. A total of 134 genes were identified, including 87 protein-coding genes, 39 tRNA genes, and eight rRNA genes. Phylogenetic tree showed that B. ischaemum was closer to B. decipiens and B. alta, genus Bothriochloa was closely related to genus Pseudanthistiria. Our findings will be helpful for better understanding of genetic diversity of Bothriochloa plants. Taylor & Francis 2022-05-12 /pmc/articles/PMC9126563/ /pubmed/35614976 http://dx.doi.org/10.1080/23802359.2022.2073850 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Plastome Announcement Li, Yu-ying Xu, Hong-yu Zhong, Hua Yang, Zhi-qing Dong, Kuan-hu Xia, Fang-shan The complete chloroplast genome of Bothriochloa ischaemum |
title | The complete chloroplast genome of Bothriochloa ischaemum |
title_full | The complete chloroplast genome of Bothriochloa ischaemum |
title_fullStr | The complete chloroplast genome of Bothriochloa ischaemum |
title_full_unstemmed | The complete chloroplast genome of Bothriochloa ischaemum |
title_short | The complete chloroplast genome of Bothriochloa ischaemum |
title_sort | complete chloroplast genome of bothriochloa ischaemum |
topic | Plastome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9126563/ https://www.ncbi.nlm.nih.gov/pubmed/35614976 http://dx.doi.org/10.1080/23802359.2022.2073850 |
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