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The complete chloroplast genome of Bothriochloa ischaemum

Bothriochloa ischaemum (Linn.) 1936 is a high-quality perennial forage in Loess Plateau of China. In this study, we sequenced and characterized the complete chloroplast genome of B. ischaemum, which was a circular DNA of 138,316 bp in length, including a large single copy (LSC) region of 80,226 bp,...

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Autores principales: Li, Yu-ying, Xu, Hong-yu, Zhong, Hua, Yang, Zhi-qing, Dong, Kuan-hu, Xia, Fang-shan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9126563/
https://www.ncbi.nlm.nih.gov/pubmed/35614976
http://dx.doi.org/10.1080/23802359.2022.2073850
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author Li, Yu-ying
Xu, Hong-yu
Zhong, Hua
Yang, Zhi-qing
Dong, Kuan-hu
Xia, Fang-shan
author_facet Li, Yu-ying
Xu, Hong-yu
Zhong, Hua
Yang, Zhi-qing
Dong, Kuan-hu
Xia, Fang-shan
author_sort Li, Yu-ying
collection PubMed
description Bothriochloa ischaemum (Linn.) 1936 is a high-quality perennial forage in Loess Plateau of China. In this study, we sequenced and characterized the complete chloroplast genome of B. ischaemum, which was a circular DNA of 138,316 bp in length, including a large single copy (LSC) region of 80,226 bp, a small single copy (SSC) region of 12,526 bp, and the circular DNA was separated by a pair of identical inverted repeat regions (IRs) of 22,782 bp each. A total of 134 genes were identified, including 87 protein-coding genes, 39 tRNA genes, and eight rRNA genes. Phylogenetic tree showed that B. ischaemum was closer to B. decipiens and B. alta, genus Bothriochloa was closely related to genus Pseudanthistiria. Our findings will be helpful for better understanding of genetic diversity of Bothriochloa plants.
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spelling pubmed-91265632022-05-24 The complete chloroplast genome of Bothriochloa ischaemum Li, Yu-ying Xu, Hong-yu Zhong, Hua Yang, Zhi-qing Dong, Kuan-hu Xia, Fang-shan Mitochondrial DNA B Resour Plastome Announcement Bothriochloa ischaemum (Linn.) 1936 is a high-quality perennial forage in Loess Plateau of China. In this study, we sequenced and characterized the complete chloroplast genome of B. ischaemum, which was a circular DNA of 138,316 bp in length, including a large single copy (LSC) region of 80,226 bp, a small single copy (SSC) region of 12,526 bp, and the circular DNA was separated by a pair of identical inverted repeat regions (IRs) of 22,782 bp each. A total of 134 genes were identified, including 87 protein-coding genes, 39 tRNA genes, and eight rRNA genes. Phylogenetic tree showed that B. ischaemum was closer to B. decipiens and B. alta, genus Bothriochloa was closely related to genus Pseudanthistiria. Our findings will be helpful for better understanding of genetic diversity of Bothriochloa plants. Taylor & Francis 2022-05-12 /pmc/articles/PMC9126563/ /pubmed/35614976 http://dx.doi.org/10.1080/23802359.2022.2073850 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Li, Yu-ying
Xu, Hong-yu
Zhong, Hua
Yang, Zhi-qing
Dong, Kuan-hu
Xia, Fang-shan
The complete chloroplast genome of Bothriochloa ischaemum
title The complete chloroplast genome of Bothriochloa ischaemum
title_full The complete chloroplast genome of Bothriochloa ischaemum
title_fullStr The complete chloroplast genome of Bothriochloa ischaemum
title_full_unstemmed The complete chloroplast genome of Bothriochloa ischaemum
title_short The complete chloroplast genome of Bothriochloa ischaemum
title_sort complete chloroplast genome of bothriochloa ischaemum
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9126563/
https://www.ncbi.nlm.nih.gov/pubmed/35614976
http://dx.doi.org/10.1080/23802359.2022.2073850
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