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Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation

OBJECTIVES: Long noncoding RNAs (lncRNAs) are closely related to diverse diseases. However, its role in atrial fibrillation (AF) pathogenesis needs further exploration. DESIGN: We performed microarray analysis on the serum samples from 70 healthy volunteers and 70 AF patients. This study was aimed a...

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Autores principales: Zhang, Qi, Wang, Jun, Wang, Ying, Yang, Ji-Meng, Dong, Hai-Cui, Xu, Di
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9126683/
https://www.ncbi.nlm.nih.gov/pubmed/35615400
http://dx.doi.org/10.1155/2022/2799123
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author Zhang, Qi
Wang, Jun
Wang, Ying
Yang, Ji-Meng
Dong, Hai-Cui
Xu, Di
author_facet Zhang, Qi
Wang, Jun
Wang, Ying
Yang, Ji-Meng
Dong, Hai-Cui
Xu, Di
author_sort Zhang, Qi
collection PubMed
description OBJECTIVES: Long noncoding RNAs (lncRNAs) are closely related to diverse diseases. However, its role in atrial fibrillation (AF) pathogenesis needs further exploration. DESIGN: We performed microarray analysis on the serum samples from 70 healthy volunteers and 70 AF patients. This study was aimed at detecting the levels of serum lncRNAs and mRNAs and bioinformatically analyze them to establish potential marker(s) for AF diagnosis. Receiver operating curve (ROC) and area under the curve (AUC) were employed to address the AF diagnostic power of lncRNAs. RESULTS: In the AF serum samples, 753 lncRNAs and 802 mRNAs (p ≤ 0.05; fold change ≥ 2) were upregulated, and 315 lncRNAs and 153 mRNAs were downregulated, as opposed to healthy serum samples. Using bioinformatic analysis, we analyzed the top 4 differentially expressed (DE) lncRNAs, namely, NR-001587, NR-015407, NR-038455, and NR-038894, and found that the PI3K-AKT cell proliferation signaling pathway was most affected. This was in accordance with our functional analysis of DE mRNAs and adjacent lncRNAs. Notably, the elevated serum NR-001587 levels were strongly associated with AF incidence. CONCLUSIONS: Our work highlights the role of lncRNAs in AF pathogenesis and provides a novel serum biomarker for AF diagnosis.
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spelling pubmed-91266832022-05-24 Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation Zhang, Qi Wang, Jun Wang, Ying Yang, Ji-Meng Dong, Hai-Cui Xu, Di Dis Markers Research Article OBJECTIVES: Long noncoding RNAs (lncRNAs) are closely related to diverse diseases. However, its role in atrial fibrillation (AF) pathogenesis needs further exploration. DESIGN: We performed microarray analysis on the serum samples from 70 healthy volunteers and 70 AF patients. This study was aimed at detecting the levels of serum lncRNAs and mRNAs and bioinformatically analyze them to establish potential marker(s) for AF diagnosis. Receiver operating curve (ROC) and area under the curve (AUC) were employed to address the AF diagnostic power of lncRNAs. RESULTS: In the AF serum samples, 753 lncRNAs and 802 mRNAs (p ≤ 0.05; fold change ≥ 2) were upregulated, and 315 lncRNAs and 153 mRNAs were downregulated, as opposed to healthy serum samples. Using bioinformatic analysis, we analyzed the top 4 differentially expressed (DE) lncRNAs, namely, NR-001587, NR-015407, NR-038455, and NR-038894, and found that the PI3K-AKT cell proliferation signaling pathway was most affected. This was in accordance with our functional analysis of DE mRNAs and adjacent lncRNAs. Notably, the elevated serum NR-001587 levels were strongly associated with AF incidence. CONCLUSIONS: Our work highlights the role of lncRNAs in AF pathogenesis and provides a novel serum biomarker for AF diagnosis. Hindawi 2022-05-16 /pmc/articles/PMC9126683/ /pubmed/35615400 http://dx.doi.org/10.1155/2022/2799123 Text en Copyright © 2022 Qi Zhang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zhang, Qi
Wang, Jun
Wang, Ying
Yang, Ji-Meng
Dong, Hai-Cui
Xu, Di
Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation
title Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation
title_full Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation
title_fullStr Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation
title_full_unstemmed Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation
title_short Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation
title_sort functional analysis of serum long noncoding rnas in patients with atrial fibrillation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9126683/
https://www.ncbi.nlm.nih.gov/pubmed/35615400
http://dx.doi.org/10.1155/2022/2799123
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