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Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation
OBJECTIVES: Long noncoding RNAs (lncRNAs) are closely related to diverse diseases. However, its role in atrial fibrillation (AF) pathogenesis needs further exploration. DESIGN: We performed microarray analysis on the serum samples from 70 healthy volunteers and 70 AF patients. This study was aimed a...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9126683/ https://www.ncbi.nlm.nih.gov/pubmed/35615400 http://dx.doi.org/10.1155/2022/2799123 |
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author | Zhang, Qi Wang, Jun Wang, Ying Yang, Ji-Meng Dong, Hai-Cui Xu, Di |
author_facet | Zhang, Qi Wang, Jun Wang, Ying Yang, Ji-Meng Dong, Hai-Cui Xu, Di |
author_sort | Zhang, Qi |
collection | PubMed |
description | OBJECTIVES: Long noncoding RNAs (lncRNAs) are closely related to diverse diseases. However, its role in atrial fibrillation (AF) pathogenesis needs further exploration. DESIGN: We performed microarray analysis on the serum samples from 70 healthy volunteers and 70 AF patients. This study was aimed at detecting the levels of serum lncRNAs and mRNAs and bioinformatically analyze them to establish potential marker(s) for AF diagnosis. Receiver operating curve (ROC) and area under the curve (AUC) were employed to address the AF diagnostic power of lncRNAs. RESULTS: In the AF serum samples, 753 lncRNAs and 802 mRNAs (p ≤ 0.05; fold change ≥ 2) were upregulated, and 315 lncRNAs and 153 mRNAs were downregulated, as opposed to healthy serum samples. Using bioinformatic analysis, we analyzed the top 4 differentially expressed (DE) lncRNAs, namely, NR-001587, NR-015407, NR-038455, and NR-038894, and found that the PI3K-AKT cell proliferation signaling pathway was most affected. This was in accordance with our functional analysis of DE mRNAs and adjacent lncRNAs. Notably, the elevated serum NR-001587 levels were strongly associated with AF incidence. CONCLUSIONS: Our work highlights the role of lncRNAs in AF pathogenesis and provides a novel serum biomarker for AF diagnosis. |
format | Online Article Text |
id | pubmed-9126683 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-91266832022-05-24 Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation Zhang, Qi Wang, Jun Wang, Ying Yang, Ji-Meng Dong, Hai-Cui Xu, Di Dis Markers Research Article OBJECTIVES: Long noncoding RNAs (lncRNAs) are closely related to diverse diseases. However, its role in atrial fibrillation (AF) pathogenesis needs further exploration. DESIGN: We performed microarray analysis on the serum samples from 70 healthy volunteers and 70 AF patients. This study was aimed at detecting the levels of serum lncRNAs and mRNAs and bioinformatically analyze them to establish potential marker(s) for AF diagnosis. Receiver operating curve (ROC) and area under the curve (AUC) were employed to address the AF diagnostic power of lncRNAs. RESULTS: In the AF serum samples, 753 lncRNAs and 802 mRNAs (p ≤ 0.05; fold change ≥ 2) were upregulated, and 315 lncRNAs and 153 mRNAs were downregulated, as opposed to healthy serum samples. Using bioinformatic analysis, we analyzed the top 4 differentially expressed (DE) lncRNAs, namely, NR-001587, NR-015407, NR-038455, and NR-038894, and found that the PI3K-AKT cell proliferation signaling pathway was most affected. This was in accordance with our functional analysis of DE mRNAs and adjacent lncRNAs. Notably, the elevated serum NR-001587 levels were strongly associated with AF incidence. CONCLUSIONS: Our work highlights the role of lncRNAs in AF pathogenesis and provides a novel serum biomarker for AF diagnosis. Hindawi 2022-05-16 /pmc/articles/PMC9126683/ /pubmed/35615400 http://dx.doi.org/10.1155/2022/2799123 Text en Copyright © 2022 Qi Zhang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Zhang, Qi Wang, Jun Wang, Ying Yang, Ji-Meng Dong, Hai-Cui Xu, Di Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation |
title | Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation |
title_full | Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation |
title_fullStr | Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation |
title_full_unstemmed | Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation |
title_short | Functional Analysis of Serum Long Noncoding RNAs in Patients with Atrial Fibrillation |
title_sort | functional analysis of serum long noncoding rnas in patients with atrial fibrillation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9126683/ https://www.ncbi.nlm.nih.gov/pubmed/35615400 http://dx.doi.org/10.1155/2022/2799123 |
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