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Protocol for characterizing strigolactones released by plant roots

The plant hormone strigolactones (SLs) are secreted by plant roots to act as rhizospheric signals. Here, we present a protocol for characterizing plant-released SLs. We first outline all necessary steps required for collection, processing, and analysis of plant root exudates using the C(18) column f...

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Autores principales: Wang, Jian You, Chen, Guan-Ting Erica, Jamil, Muhammad, Braguy, Justine, Sioud, Salim, Liew, Kit Xi, Balakrishna, Aparna, Al-Babili, Salim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9127222/
https://www.ncbi.nlm.nih.gov/pubmed/35620066
http://dx.doi.org/10.1016/j.xpro.2022.101352
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author Wang, Jian You
Chen, Guan-Ting Erica
Jamil, Muhammad
Braguy, Justine
Sioud, Salim
Liew, Kit Xi
Balakrishna, Aparna
Al-Babili, Salim
author_facet Wang, Jian You
Chen, Guan-Ting Erica
Jamil, Muhammad
Braguy, Justine
Sioud, Salim
Liew, Kit Xi
Balakrishna, Aparna
Al-Babili, Salim
author_sort Wang, Jian You
collection PubMed
description The plant hormone strigolactones (SLs) are secreted by plant roots to act as rhizospheric signals. Here, we present a protocol for characterizing plant-released SLs. We first outline all necessary steps required for collection, processing, and analysis of plant root exudates using the C(18) column for SL extraction, followed by liquid chromatography-mass spectrometry (LC-MS) for SL quantification. We then describe image processing by SeedQuant, an open-source artificial-intelligence-based software, for measuring the biological activity of SLs in inducing root parasitic plant seed germination. For complete details on the use and execution of this protocol, please refer to Wang et al. (2019) and Braguy et al. (2021).
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spelling pubmed-91272222022-05-25 Protocol for characterizing strigolactones released by plant roots Wang, Jian You Chen, Guan-Ting Erica Jamil, Muhammad Braguy, Justine Sioud, Salim Liew, Kit Xi Balakrishna, Aparna Al-Babili, Salim STAR Protoc Protocol The plant hormone strigolactones (SLs) are secreted by plant roots to act as rhizospheric signals. Here, we present a protocol for characterizing plant-released SLs. We first outline all necessary steps required for collection, processing, and analysis of plant root exudates using the C(18) column for SL extraction, followed by liquid chromatography-mass spectrometry (LC-MS) for SL quantification. We then describe image processing by SeedQuant, an open-source artificial-intelligence-based software, for measuring the biological activity of SLs in inducing root parasitic plant seed germination. For complete details on the use and execution of this protocol, please refer to Wang et al. (2019) and Braguy et al. (2021). Elsevier 2022-05-18 /pmc/articles/PMC9127222/ /pubmed/35620066 http://dx.doi.org/10.1016/j.xpro.2022.101352 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Protocol
Wang, Jian You
Chen, Guan-Ting Erica
Jamil, Muhammad
Braguy, Justine
Sioud, Salim
Liew, Kit Xi
Balakrishna, Aparna
Al-Babili, Salim
Protocol for characterizing strigolactones released by plant roots
title Protocol for characterizing strigolactones released by plant roots
title_full Protocol for characterizing strigolactones released by plant roots
title_fullStr Protocol for characterizing strigolactones released by plant roots
title_full_unstemmed Protocol for characterizing strigolactones released by plant roots
title_short Protocol for characterizing strigolactones released by plant roots
title_sort protocol for characterizing strigolactones released by plant roots
topic Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9127222/
https://www.ncbi.nlm.nih.gov/pubmed/35620066
http://dx.doi.org/10.1016/j.xpro.2022.101352
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