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Learning models for forecasting hospital resource utilization for COVID-19 patients in Canada

Hospitals in Canada are facing a crisis-level shortage of critical supplies and equipment during the COVID-19 pandemic. This motivates us to create predictive models that can use Canada COVID-19 data and pandemic-related factors to accurately forecast 5 quantities—three related to hospital resource...

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Autores principales: Zhang, Jianfei, Pathak, Harini Sanjay, Snowdon, Anne, Greiner, Russell
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9128327/
https://www.ncbi.nlm.nih.gov/pubmed/35610273
http://dx.doi.org/10.1038/s41598-022-12491-z
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author Zhang, Jianfei
Pathak, Harini Sanjay
Snowdon, Anne
Greiner, Russell
author_facet Zhang, Jianfei
Pathak, Harini Sanjay
Snowdon, Anne
Greiner, Russell
author_sort Zhang, Jianfei
collection PubMed
description Hospitals in Canada are facing a crisis-level shortage of critical supplies and equipment during the COVID-19 pandemic. This motivates us to create predictive models that can use Canada COVID-19 data and pandemic-related factors to accurately forecast 5 quantities—three related to hospital resource utilization (i.e., the number of hospital beds, ICU beds, and ventilators that will be needed by COVID-19 patients) and two to the pandemic progress (i.e., the number of COVID-19 cases and COVID-19 deaths)—several weeks in advance. We developed a machine learning method that can use information (i.e., resource utilization, pandemic progress, population mobility, weather condition, and public policy) currently known about a region since March 2020, to learn multiple temporal convolutional network (TCN) models every week; each used for forecasting the weekly average of one of these 5 quantities in Canada (respectively, in six specific provinces) for each, in the next 1 (resp., 2,3,4) weeks. To validate the effectiveness of our method, we compared our method, versus other standard models, on the COVID-19 data and hospital resource data, on the tasks of predicting the 116 values (for Canada and its six most populated provinces), every week from Oct 2020 to July 2021, and the 20 values (only for Canada) for four specific times within 9 July to 31 Dec 2021. Experimental results show that our 4640 TCN models (each forecasting a regional target for a specific future time, on a specific date) can produce accurate 1,2,3,4-week forecasts of the utilization of every hospital resource and pandemic progress for each week from 2 Oct 2020 to 2 July 2021, as well as 80 TCN models for each of the four specified times within 9 July and 31 Dec 2021. Compared to other baseline and state-of-the-art predictive models, our TCN models yielded the best forecasts, with the lowest mean absolute percentage error (MAPE). Additional experiments, on the IHME COVID-19 data, demonstrate the effectiveness of our TCN models, in comparison with IHME forecasts. Each of our TCN models used a pre-defined set of features; we experimentally validate the effectiveness of these features by showing that these models perform better than other models that instead used other features. Overall, these experimental results demonstrate that our method can accurately forecast hospital resource utilization and pandemic progress for Canada and for each of the six provinces.
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spelling pubmed-91283272022-05-24 Learning models for forecasting hospital resource utilization for COVID-19 patients in Canada Zhang, Jianfei Pathak, Harini Sanjay Snowdon, Anne Greiner, Russell Sci Rep Article Hospitals in Canada are facing a crisis-level shortage of critical supplies and equipment during the COVID-19 pandemic. This motivates us to create predictive models that can use Canada COVID-19 data and pandemic-related factors to accurately forecast 5 quantities—three related to hospital resource utilization (i.e., the number of hospital beds, ICU beds, and ventilators that will be needed by COVID-19 patients) and two to the pandemic progress (i.e., the number of COVID-19 cases and COVID-19 deaths)—several weeks in advance. We developed a machine learning method that can use information (i.e., resource utilization, pandemic progress, population mobility, weather condition, and public policy) currently known about a region since March 2020, to learn multiple temporal convolutional network (TCN) models every week; each used for forecasting the weekly average of one of these 5 quantities in Canada (respectively, in six specific provinces) for each, in the next 1 (resp., 2,3,4) weeks. To validate the effectiveness of our method, we compared our method, versus other standard models, on the COVID-19 data and hospital resource data, on the tasks of predicting the 116 values (for Canada and its six most populated provinces), every week from Oct 2020 to July 2021, and the 20 values (only for Canada) for four specific times within 9 July to 31 Dec 2021. Experimental results show that our 4640 TCN models (each forecasting a regional target for a specific future time, on a specific date) can produce accurate 1,2,3,4-week forecasts of the utilization of every hospital resource and pandemic progress for each week from 2 Oct 2020 to 2 July 2021, as well as 80 TCN models for each of the four specified times within 9 July and 31 Dec 2021. Compared to other baseline and state-of-the-art predictive models, our TCN models yielded the best forecasts, with the lowest mean absolute percentage error (MAPE). Additional experiments, on the IHME COVID-19 data, demonstrate the effectiveness of our TCN models, in comparison with IHME forecasts. Each of our TCN models used a pre-defined set of features; we experimentally validate the effectiveness of these features by showing that these models perform better than other models that instead used other features. Overall, these experimental results demonstrate that our method can accurately forecast hospital resource utilization and pandemic progress for Canada and for each of the six provinces. Nature Publishing Group UK 2022-05-24 /pmc/articles/PMC9128327/ /pubmed/35610273 http://dx.doi.org/10.1038/s41598-022-12491-z Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Zhang, Jianfei
Pathak, Harini Sanjay
Snowdon, Anne
Greiner, Russell
Learning models for forecasting hospital resource utilization for COVID-19 patients in Canada
title Learning models for forecasting hospital resource utilization for COVID-19 patients in Canada
title_full Learning models for forecasting hospital resource utilization for COVID-19 patients in Canada
title_fullStr Learning models for forecasting hospital resource utilization for COVID-19 patients in Canada
title_full_unstemmed Learning models for forecasting hospital resource utilization for COVID-19 patients in Canada
title_short Learning models for forecasting hospital resource utilization for COVID-19 patients in Canada
title_sort learning models for forecasting hospital resource utilization for covid-19 patients in canada
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9128327/
https://www.ncbi.nlm.nih.gov/pubmed/35610273
http://dx.doi.org/10.1038/s41598-022-12491-z
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