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Development and Validation of a Risk Prediction Model for Breast Cancer Prognosis Based on Depression-Related Genes
BACKGROUND: Depression plays a significant role in mediating breast cancer recurrence and metastasis. However, a precise risk model is lacking to evaluate the potential impact of depression on breast cancer prognosis. In this study, we established a depression-related gene (DRG) signature that can p...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9128552/ https://www.ncbi.nlm.nih.gov/pubmed/35619902 http://dx.doi.org/10.3389/fonc.2022.879563 |
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author | Wang, Xuan Wang, Neng Zhong, Linda L. D. Su, Kexin Wang, Shengqi Zheng, Yifeng Yang, Bowen Zhang, Juping Pan, Bo Yang, Wei Wang, Zhiyu |
author_facet | Wang, Xuan Wang, Neng Zhong, Linda L. D. Su, Kexin Wang, Shengqi Zheng, Yifeng Yang, Bowen Zhang, Juping Pan, Bo Yang, Wei Wang, Zhiyu |
author_sort | Wang, Xuan |
collection | PubMed |
description | BACKGROUND: Depression plays a significant role in mediating breast cancer recurrence and metastasis. However, a precise risk model is lacking to evaluate the potential impact of depression on breast cancer prognosis. In this study, we established a depression-related gene (DRG) signature that can predict overall survival (OS) and elucidate its correlation with pathological parameters and sensitivity to therapy in breast cancer. METHODS: The model training and validation assays were based on the analyses of 1,096 patients from The Cancer Genome Atlas (TCGA) database and 2,969 patients from GSE96058. A risk signature was established through univariate and multivariate Cox regression analyses. RESULTS: Ten DRGs were determined to construct the risk signature. Multivariate analysis revealed that the signature was an independent prognostic factor for OS. Receiver operating characteristic (ROC) curves indicated good performance of the model in predicting 1-, 3-, and 5-year OS, particularly for patients with triple-negative breast cancer (TNBC). In the high-risk group, the proportion of immunosuppressive cells, including M0 macrophages, M2 macrophages, and neutrophils, was higher than that in the low-risk group. Furthermore, low-risk patients responded better to chemotherapy and endocrine therapy. Finally, a nomogram integrating risk score, age, tumor-node-metastasis (TNM) stage, and molecular subtypes were established, and it showed good agreement between the predicted and observed OS. CONCLUSION: The 10-gene risk model not only highlights the significance of depression in breast cancer prognosis but also provides a novel gene-testing tool to better prevent the potential adverse impact of depression on breast cancer prognosis. |
format | Online Article Text |
id | pubmed-9128552 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91285522022-05-25 Development and Validation of a Risk Prediction Model for Breast Cancer Prognosis Based on Depression-Related Genes Wang, Xuan Wang, Neng Zhong, Linda L. D. Su, Kexin Wang, Shengqi Zheng, Yifeng Yang, Bowen Zhang, Juping Pan, Bo Yang, Wei Wang, Zhiyu Front Oncol Oncology BACKGROUND: Depression plays a significant role in mediating breast cancer recurrence and metastasis. However, a precise risk model is lacking to evaluate the potential impact of depression on breast cancer prognosis. In this study, we established a depression-related gene (DRG) signature that can predict overall survival (OS) and elucidate its correlation with pathological parameters and sensitivity to therapy in breast cancer. METHODS: The model training and validation assays were based on the analyses of 1,096 patients from The Cancer Genome Atlas (TCGA) database and 2,969 patients from GSE96058. A risk signature was established through univariate and multivariate Cox regression analyses. RESULTS: Ten DRGs were determined to construct the risk signature. Multivariate analysis revealed that the signature was an independent prognostic factor for OS. Receiver operating characteristic (ROC) curves indicated good performance of the model in predicting 1-, 3-, and 5-year OS, particularly for patients with triple-negative breast cancer (TNBC). In the high-risk group, the proportion of immunosuppressive cells, including M0 macrophages, M2 macrophages, and neutrophils, was higher than that in the low-risk group. Furthermore, low-risk patients responded better to chemotherapy and endocrine therapy. Finally, a nomogram integrating risk score, age, tumor-node-metastasis (TNM) stage, and molecular subtypes were established, and it showed good agreement between the predicted and observed OS. CONCLUSION: The 10-gene risk model not only highlights the significance of depression in breast cancer prognosis but also provides a novel gene-testing tool to better prevent the potential adverse impact of depression on breast cancer prognosis. Frontiers Media S.A. 2022-05-10 /pmc/articles/PMC9128552/ /pubmed/35619902 http://dx.doi.org/10.3389/fonc.2022.879563 Text en Copyright © 2022 Wang, Wang, Zhong, Su, Wang, Zheng, Yang, Zhang, Pan, Yang and Wang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Wang, Xuan Wang, Neng Zhong, Linda L. D. Su, Kexin Wang, Shengqi Zheng, Yifeng Yang, Bowen Zhang, Juping Pan, Bo Yang, Wei Wang, Zhiyu Development and Validation of a Risk Prediction Model for Breast Cancer Prognosis Based on Depression-Related Genes |
title | Development and Validation of a Risk Prediction Model for Breast Cancer Prognosis Based on Depression-Related Genes |
title_full | Development and Validation of a Risk Prediction Model for Breast Cancer Prognosis Based on Depression-Related Genes |
title_fullStr | Development and Validation of a Risk Prediction Model for Breast Cancer Prognosis Based on Depression-Related Genes |
title_full_unstemmed | Development and Validation of a Risk Prediction Model for Breast Cancer Prognosis Based on Depression-Related Genes |
title_short | Development and Validation of a Risk Prediction Model for Breast Cancer Prognosis Based on Depression-Related Genes |
title_sort | development and validation of a risk prediction model for breast cancer prognosis based on depression-related genes |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9128552/ https://www.ncbi.nlm.nih.gov/pubmed/35619902 http://dx.doi.org/10.3389/fonc.2022.879563 |
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