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Online Phylogenetics using Parsimony Produces Slightly Better Trees and is Dramatically More Efficient for Large SARS-CoV-2 Phylogenies than de novo and Maximum-Likelihood Approaches
Phylogenetics has been foundational to SARS-CoV-2 research and public health policy, assisting in genomic surveillance, contact tracing, and assessing emergence and spread of new variants. However, phylogenetic analyses of SARS-CoV-2 have often relied on tools designed for de novo phylogenetic infer...
Autores principales: | Thornlow, Bryan, Kramer, Alexander, Ye, Cheng, De Maio, Nicola, McBroome, Jakob, Hinrichs, Angie S., Lanfear, Robert, Turakhia, Yatish, Corbett-Detig, Russell |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9128781/ https://www.ncbi.nlm.nih.gov/pubmed/35611334 http://dx.doi.org/10.1101/2021.12.02.471004 |
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