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Development and validation of predictive models for COVID-19 outcomes in a safety-net hospital population
OBJECTIVE: To develop predictive models of coronavirus disease 2019 (COVID-19) outcomes, elucidate the influence of socioeconomic factors, and assess algorithmic racial fairness using a racially diverse patient population with high social needs. MATERIALS AND METHODS: Data included 7,102 patients wi...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9129120/ https://www.ncbi.nlm.nih.gov/pubmed/35441692 http://dx.doi.org/10.1093/jamia/ocac062 |
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author | Hao, Boran Hu, Yang Sotudian, Shahabeddin Zad, Zahra Adams, William G Assoumou, Sabrina A Hsu, Heather Mishuris, Rebecca G Paschalidis, Ioannis C |
author_facet | Hao, Boran Hu, Yang Sotudian, Shahabeddin Zad, Zahra Adams, William G Assoumou, Sabrina A Hsu, Heather Mishuris, Rebecca G Paschalidis, Ioannis C |
author_sort | Hao, Boran |
collection | PubMed |
description | OBJECTIVE: To develop predictive models of coronavirus disease 2019 (COVID-19) outcomes, elucidate the influence of socioeconomic factors, and assess algorithmic racial fairness using a racially diverse patient population with high social needs. MATERIALS AND METHODS: Data included 7,102 patients with positive (RT-PCR) severe acute respiratory syndrome coronavirus 2 test at a safety-net system in Massachusetts. Linear and nonlinear classification methods were applied. A score based on a recurrent neural network and a transformer architecture was developed to capture the dynamic evolution of vital signs. Combined with patient characteristics, clinical variables, and hospital occupancy measures, this dynamic vital score was used to train predictive models. RESULTS: Hospitalizations can be predicted with an area under the receiver-operating characteristic curve (AUC) of 92% using symptoms, hospital occupancy, and patient characteristics, including social determinants of health. Parsimonious models to predict intensive care, mechanical ventilation, and mortality that used the most recent labs and vitals exhibited AUCs of 92.7%, 91.2%, and 94%, respectively. Early predictive models, using labs and vital signs closer to admission had AUCs of 81.1%, 84.9%, and 92%, respectively. DISCUSSION: The most accurate models exhibit racial bias, being more likely to falsely predict that Black patients will be hospitalized. Models that are only based on the dynamic vital score exhibited accuracies close to the best parsimonious models, although the latter also used laboratories. CONCLUSIONS: This large study demonstrates that COVID-19 severity may accurately be predicted using a score that accounts for the dynamic evolution of vital signs. Further, race, social determinants of health, and hospital occupancy play an important role. |
format | Online Article Text |
id | pubmed-9129120 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-91291202022-05-25 Development and validation of predictive models for COVID-19 outcomes in a safety-net hospital population Hao, Boran Hu, Yang Sotudian, Shahabeddin Zad, Zahra Adams, William G Assoumou, Sabrina A Hsu, Heather Mishuris, Rebecca G Paschalidis, Ioannis C J Am Med Inform Assoc Research and Applications OBJECTIVE: To develop predictive models of coronavirus disease 2019 (COVID-19) outcomes, elucidate the influence of socioeconomic factors, and assess algorithmic racial fairness using a racially diverse patient population with high social needs. MATERIALS AND METHODS: Data included 7,102 patients with positive (RT-PCR) severe acute respiratory syndrome coronavirus 2 test at a safety-net system in Massachusetts. Linear and nonlinear classification methods were applied. A score based on a recurrent neural network and a transformer architecture was developed to capture the dynamic evolution of vital signs. Combined with patient characteristics, clinical variables, and hospital occupancy measures, this dynamic vital score was used to train predictive models. RESULTS: Hospitalizations can be predicted with an area under the receiver-operating characteristic curve (AUC) of 92% using symptoms, hospital occupancy, and patient characteristics, including social determinants of health. Parsimonious models to predict intensive care, mechanical ventilation, and mortality that used the most recent labs and vitals exhibited AUCs of 92.7%, 91.2%, and 94%, respectively. Early predictive models, using labs and vital signs closer to admission had AUCs of 81.1%, 84.9%, and 92%, respectively. DISCUSSION: The most accurate models exhibit racial bias, being more likely to falsely predict that Black patients will be hospitalized. Models that are only based on the dynamic vital score exhibited accuracies close to the best parsimonious models, although the latter also used laboratories. CONCLUSIONS: This large study demonstrates that COVID-19 severity may accurately be predicted using a score that accounts for the dynamic evolution of vital signs. Further, race, social determinants of health, and hospital occupancy play an important role. Oxford University Press 2022-05-09 /pmc/articles/PMC9129120/ /pubmed/35441692 http://dx.doi.org/10.1093/jamia/ocac062 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For permissions, please email: journals.permissions@oup.com https://academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_modelThis article is published and distributed under the terms of the Oxford University Press, Standard Journals Publication Model (https://academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_model) |
spellingShingle | Research and Applications Hao, Boran Hu, Yang Sotudian, Shahabeddin Zad, Zahra Adams, William G Assoumou, Sabrina A Hsu, Heather Mishuris, Rebecca G Paschalidis, Ioannis C Development and validation of predictive models for COVID-19 outcomes in a safety-net hospital population |
title | Development and validation of predictive models for COVID-19 outcomes in a safety-net hospital population |
title_full | Development and validation of predictive models for COVID-19 outcomes in a safety-net hospital population |
title_fullStr | Development and validation of predictive models for COVID-19 outcomes in a safety-net hospital population |
title_full_unstemmed | Development and validation of predictive models for COVID-19 outcomes in a safety-net hospital population |
title_short | Development and validation of predictive models for COVID-19 outcomes in a safety-net hospital population |
title_sort | development and validation of predictive models for covid-19 outcomes in a safety-net hospital population |
topic | Research and Applications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9129120/ https://www.ncbi.nlm.nih.gov/pubmed/35441692 http://dx.doi.org/10.1093/jamia/ocac062 |
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