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Predicting hospitalization of COVID-19 positive patients using clinician-guided machine learning methods

OBJECTIVES: The coronavirus disease 2019 (COVID-19) is a resource-intensive global pandemic. It is important for healthcare systems to identify high-risk COVID-19-positive patients who need timely health care. This study was conducted to predict the hospitalization of older adults who have tested po...

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Autores principales: Song, Wenyu, Zhang, Linying, Liu, Luwei, Sainlaire, Michael, Karvar, Mehran, Kang, Min-Jeoung, Pullman, Avery, Lipsitz, Stuart, Massaro, Anthony, Patil, Namrata, Jasuja, Ravi, Dykes, Patricia C
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9129151/
https://www.ncbi.nlm.nih.gov/pubmed/35595237
http://dx.doi.org/10.1093/jamia/ocac083
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author Song, Wenyu
Zhang, Linying
Liu, Luwei
Sainlaire, Michael
Karvar, Mehran
Kang, Min-Jeoung
Pullman, Avery
Lipsitz, Stuart
Massaro, Anthony
Patil, Namrata
Jasuja, Ravi
Dykes, Patricia C
author_facet Song, Wenyu
Zhang, Linying
Liu, Luwei
Sainlaire, Michael
Karvar, Mehran
Kang, Min-Jeoung
Pullman, Avery
Lipsitz, Stuart
Massaro, Anthony
Patil, Namrata
Jasuja, Ravi
Dykes, Patricia C
author_sort Song, Wenyu
collection PubMed
description OBJECTIVES: The coronavirus disease 2019 (COVID-19) is a resource-intensive global pandemic. It is important for healthcare systems to identify high-risk COVID-19-positive patients who need timely health care. This study was conducted to predict the hospitalization of older adults who have tested positive for COVID-19. METHODS: We screened all patients with COVID test records from 11 Mass General Brigham hospitals to identify the study population. A total of 1495 patients with age 65 and above from the outpatient setting were included in the final cohort, among which 459 patients were hospitalized. We conducted a clinician-guided, 3-stage feature selection, and phenotyping process using iterative combinations of literature review, clinician expert opinion, and electronic healthcare record data exploration. A list of 44 features, including temporal features, was generated from this process and used for model training. Four machine learning prediction models were developed, including regularized logistic regression, support vector machine, random forest, and neural network. RESULTS: All 4 models achieved area under the receiver operating characteristic curve (AUC) greater than 0.80. Random forest achieved the best predictive performance (AUC = 0.83). Albumin, an index for nutritional status, was found to have the strongest association with hospitalization among COVID positive older adults. CONCLUSIONS: In this study, we developed 4 machine learning models for predicting general hospitalization among COVID positive older adults. We identified important clinical factors associated with hospitalization and observed temporal patterns in our study cohort. Our modeling pipeline and algorithm could potentially be used to facilitate more accurate and efficient decision support for triaging COVID positive patients.
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spelling pubmed-91291512022-05-25 Predicting hospitalization of COVID-19 positive patients using clinician-guided machine learning methods Song, Wenyu Zhang, Linying Liu, Luwei Sainlaire, Michael Karvar, Mehran Kang, Min-Jeoung Pullman, Avery Lipsitz, Stuart Massaro, Anthony Patil, Namrata Jasuja, Ravi Dykes, Patricia C J Am Med Inform Assoc Research and Applications OBJECTIVES: The coronavirus disease 2019 (COVID-19) is a resource-intensive global pandemic. It is important for healthcare systems to identify high-risk COVID-19-positive patients who need timely health care. This study was conducted to predict the hospitalization of older adults who have tested positive for COVID-19. METHODS: We screened all patients with COVID test records from 11 Mass General Brigham hospitals to identify the study population. A total of 1495 patients with age 65 and above from the outpatient setting were included in the final cohort, among which 459 patients were hospitalized. We conducted a clinician-guided, 3-stage feature selection, and phenotyping process using iterative combinations of literature review, clinician expert opinion, and electronic healthcare record data exploration. A list of 44 features, including temporal features, was generated from this process and used for model training. Four machine learning prediction models were developed, including regularized logistic regression, support vector machine, random forest, and neural network. RESULTS: All 4 models achieved area under the receiver operating characteristic curve (AUC) greater than 0.80. Random forest achieved the best predictive performance (AUC = 0.83). Albumin, an index for nutritional status, was found to have the strongest association with hospitalization among COVID positive older adults. CONCLUSIONS: In this study, we developed 4 machine learning models for predicting general hospitalization among COVID positive older adults. We identified important clinical factors associated with hospitalization and observed temporal patterns in our study cohort. Our modeling pipeline and algorithm could potentially be used to facilitate more accurate and efficient decision support for triaging COVID positive patients. Oxford University Press 2022-05-25 /pmc/articles/PMC9129151/ /pubmed/35595237 http://dx.doi.org/10.1093/jamia/ocac083 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For permissions, please email: journals.permissions@oup.com https://academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_modelThis article is published and distributed under the terms of the Oxford University Press, Standard Journals Publication Model (https://academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_model)
spellingShingle Research and Applications
Song, Wenyu
Zhang, Linying
Liu, Luwei
Sainlaire, Michael
Karvar, Mehran
Kang, Min-Jeoung
Pullman, Avery
Lipsitz, Stuart
Massaro, Anthony
Patil, Namrata
Jasuja, Ravi
Dykes, Patricia C
Predicting hospitalization of COVID-19 positive patients using clinician-guided machine learning methods
title Predicting hospitalization of COVID-19 positive patients using clinician-guided machine learning methods
title_full Predicting hospitalization of COVID-19 positive patients using clinician-guided machine learning methods
title_fullStr Predicting hospitalization of COVID-19 positive patients using clinician-guided machine learning methods
title_full_unstemmed Predicting hospitalization of COVID-19 positive patients using clinician-guided machine learning methods
title_short Predicting hospitalization of COVID-19 positive patients using clinician-guided machine learning methods
title_sort predicting hospitalization of covid-19 positive patients using clinician-guided machine learning methods
topic Research and Applications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9129151/
https://www.ncbi.nlm.nih.gov/pubmed/35595237
http://dx.doi.org/10.1093/jamia/ocac083
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