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The regulatory mechanism of LncRNA-mediated ceRNA network in osteosarcoma

Aberrantly expressed lncRNAs have been reported to be closely related to the oncogenesis and development of osteosarcoma. However, the role of a dysregulated lncRNA-miRNA-mRNA network in osteosarcoma in the same individual needs to be further investigated. Whole transcriptome sequencing was performe...

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Autores principales: Lin, Chengsen, Miao, Jifeng, He, Juliang, Feng, Wenyu, Chen, Xianxiang, Jiang, Xiaohong, Liu, Jianhong, Li, Boxiang, Huang, Qian, Liao, Shijie, Liu, Yun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9130241/
https://www.ncbi.nlm.nih.gov/pubmed/35610231
http://dx.doi.org/10.1038/s41598-022-11371-w
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author Lin, Chengsen
Miao, Jifeng
He, Juliang
Feng, Wenyu
Chen, Xianxiang
Jiang, Xiaohong
Liu, Jianhong
Li, Boxiang
Huang, Qian
Liao, Shijie
Liu, Yun
author_facet Lin, Chengsen
Miao, Jifeng
He, Juliang
Feng, Wenyu
Chen, Xianxiang
Jiang, Xiaohong
Liu, Jianhong
Li, Boxiang
Huang, Qian
Liao, Shijie
Liu, Yun
author_sort Lin, Chengsen
collection PubMed
description Aberrantly expressed lncRNAs have been reported to be closely related to the oncogenesis and development of osteosarcoma. However, the role of a dysregulated lncRNA-miRNA-mRNA network in osteosarcoma in the same individual needs to be further investigated. Whole transcriptome sequencing was performed on the tumour tissues and matched paratumour tissues of three patients with confirmed osteosarcoma. Two divergent lncRNA-miRNA-mRNA regulatory networks were constructed in accordance with their biological significance. The GO and KEGG analysis results of the mRNAs in the two networks revealed that the aberrantly expressed lncRNAs were involved in regulating bone growth and development, epithelial cell proliferation, cell cycle arrest and the N-terminal acetylation of proteins. The survival analysis results of the two networks showed that patients with high expression of GALNT3, FAM91A1, STC2 and SLC7A1 end in poorer prognosis. Likewise, patients with low expression of IGF2, BLCAP, ZBTB47, THRB, PKIA and MITF also had poor prognosis. A subnetwork was then constructed to demonstrate the key genes regulated by aberrantly expressed lncRNAs at the posttranscriptional level via the ceRNA network. Aberrantly expressed lncRNAs in osteosarcoma tissues regulate genes involved in cellular proliferation, differentiation, angiogenesis and the cell cycle via the ceRNA network.
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spelling pubmed-91302412022-05-26 The regulatory mechanism of LncRNA-mediated ceRNA network in osteosarcoma Lin, Chengsen Miao, Jifeng He, Juliang Feng, Wenyu Chen, Xianxiang Jiang, Xiaohong Liu, Jianhong Li, Boxiang Huang, Qian Liao, Shijie Liu, Yun Sci Rep Article Aberrantly expressed lncRNAs have been reported to be closely related to the oncogenesis and development of osteosarcoma. However, the role of a dysregulated lncRNA-miRNA-mRNA network in osteosarcoma in the same individual needs to be further investigated. Whole transcriptome sequencing was performed on the tumour tissues and matched paratumour tissues of three patients with confirmed osteosarcoma. Two divergent lncRNA-miRNA-mRNA regulatory networks were constructed in accordance with their biological significance. The GO and KEGG analysis results of the mRNAs in the two networks revealed that the aberrantly expressed lncRNAs were involved in regulating bone growth and development, epithelial cell proliferation, cell cycle arrest and the N-terminal acetylation of proteins. The survival analysis results of the two networks showed that patients with high expression of GALNT3, FAM91A1, STC2 and SLC7A1 end in poorer prognosis. Likewise, patients with low expression of IGF2, BLCAP, ZBTB47, THRB, PKIA and MITF also had poor prognosis. A subnetwork was then constructed to demonstrate the key genes regulated by aberrantly expressed lncRNAs at the posttranscriptional level via the ceRNA network. Aberrantly expressed lncRNAs in osteosarcoma tissues regulate genes involved in cellular proliferation, differentiation, angiogenesis and the cell cycle via the ceRNA network. Nature Publishing Group UK 2022-05-24 /pmc/articles/PMC9130241/ /pubmed/35610231 http://dx.doi.org/10.1038/s41598-022-11371-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Lin, Chengsen
Miao, Jifeng
He, Juliang
Feng, Wenyu
Chen, Xianxiang
Jiang, Xiaohong
Liu, Jianhong
Li, Boxiang
Huang, Qian
Liao, Shijie
Liu, Yun
The regulatory mechanism of LncRNA-mediated ceRNA network in osteosarcoma
title The regulatory mechanism of LncRNA-mediated ceRNA network in osteosarcoma
title_full The regulatory mechanism of LncRNA-mediated ceRNA network in osteosarcoma
title_fullStr The regulatory mechanism of LncRNA-mediated ceRNA network in osteosarcoma
title_full_unstemmed The regulatory mechanism of LncRNA-mediated ceRNA network in osteosarcoma
title_short The regulatory mechanism of LncRNA-mediated ceRNA network in osteosarcoma
title_sort regulatory mechanism of lncrna-mediated cerna network in osteosarcoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9130241/
https://www.ncbi.nlm.nih.gov/pubmed/35610231
http://dx.doi.org/10.1038/s41598-022-11371-w
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