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Molecular Identification of Lactic Acid Bacteria an Approach to Sustainable Food Security
BACKGROUND: Dadiah is a traditional dish from West Sumatra made from buffalo milk, which is fermented in bamboo tubes and left at room temperature for ±2 days. Dadiah is included in the staple food category because it contains Lactic Acid Bacteria (LAB), which has the potential to be a probiotic. Th...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9131486/ https://www.ncbi.nlm.nih.gov/pubmed/34818881 http://dx.doi.org/10.4081/jphr.2021.2508 |
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author | Abdullah, Dessy Poddar, Sandeep Rai, Ramesh Prasath Purwati, Endang Dewi, Nadia Purnama Pratama, Yudha Endra |
author_facet | Abdullah, Dessy Poddar, Sandeep Rai, Ramesh Prasath Purwati, Endang Dewi, Nadia Purnama Pratama, Yudha Endra |
author_sort | Abdullah, Dessy |
collection | PubMed |
description | BACKGROUND: Dadiah is a traditional dish from West Sumatra made from buffalo milk, which is fermented in bamboo tubes and left at room temperature for ±2 days. Dadiah is included in the staple food category because it contains Lactic Acid Bacteria (LAB), which has the potential to be a probiotic. This study aims to determine the identification and characterization of LAB from Dadiah from Halaban, Kab. Fifty Cities, West Sumatra. DESIGN AND METHODS: A survey method was used in this research with a descriptive analysis, Antimicrobial activity testing was done with bacteria Escherichia coli O157, Staphylococcus aureus, Listeria monocytogenes, and Listeria innocua. Molecular identification was done using the 16S rRNA gene. RESULTS: Probiotic candidate test with the best results in testing for resistance to stomach acid at pH3 with the viability of 65.98%, bile salt resistance 0.3%, viability of 54.90% from 2DA isolates. Antimicrobial activity with the best clear zone area results was obtained in 2DA isolates with Escherichia coli O157 test bacteria of 21.16 mm, Staphylococcus aureus with a clear zone area of 23.17 mm, Listeria innocua of 19.24 mm and Listeria monocytogenes with a clear zone area 18.23 mm in 4DA isolate, LAB identification using 16S sRNA gene, results of running PCR base length 1419bp. CONCLUSIONS: Phylogenetic analysis shows that Dadiah of Limapuluh Kota Regency is a kin to Lactobacillus plantarum. The superiority of identification technology by using 16S rRNA gene only can be conducted if the nucleotide sequence information of the targeted bacteria is known beforehand. |
format | Online Article Text |
id | pubmed-9131486 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-91314862022-05-26 Molecular Identification of Lactic Acid Bacteria an Approach to Sustainable Food Security Abdullah, Dessy Poddar, Sandeep Rai, Ramesh Prasath Purwati, Endang Dewi, Nadia Purnama Pratama, Yudha Endra J Public Health Res Article BACKGROUND: Dadiah is a traditional dish from West Sumatra made from buffalo milk, which is fermented in bamboo tubes and left at room temperature for ±2 days. Dadiah is included in the staple food category because it contains Lactic Acid Bacteria (LAB), which has the potential to be a probiotic. This study aims to determine the identification and characterization of LAB from Dadiah from Halaban, Kab. Fifty Cities, West Sumatra. DESIGN AND METHODS: A survey method was used in this research with a descriptive analysis, Antimicrobial activity testing was done with bacteria Escherichia coli O157, Staphylococcus aureus, Listeria monocytogenes, and Listeria innocua. Molecular identification was done using the 16S rRNA gene. RESULTS: Probiotic candidate test with the best results in testing for resistance to stomach acid at pH3 with the viability of 65.98%, bile salt resistance 0.3%, viability of 54.90% from 2DA isolates. Antimicrobial activity with the best clear zone area results was obtained in 2DA isolates with Escherichia coli O157 test bacteria of 21.16 mm, Staphylococcus aureus with a clear zone area of 23.17 mm, Listeria innocua of 19.24 mm and Listeria monocytogenes with a clear zone area 18.23 mm in 4DA isolate, LAB identification using 16S sRNA gene, results of running PCR base length 1419bp. CONCLUSIONS: Phylogenetic analysis shows that Dadiah of Limapuluh Kota Regency is a kin to Lactobacillus plantarum. The superiority of identification technology by using 16S rRNA gene only can be conducted if the nucleotide sequence information of the targeted bacteria is known beforehand. SAGE Publications 2022-05-16 /pmc/articles/PMC9131486/ /pubmed/34818881 http://dx.doi.org/10.4081/jphr.2021.2508 Text en © 2021 SAGE Publications Ltd unless otherwise noted https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Article Abdullah, Dessy Poddar, Sandeep Rai, Ramesh Prasath Purwati, Endang Dewi, Nadia Purnama Pratama, Yudha Endra Molecular Identification of Lactic Acid Bacteria an Approach to Sustainable Food Security |
title | Molecular Identification of Lactic Acid Bacteria an Approach to
Sustainable Food Security |
title_full | Molecular Identification of Lactic Acid Bacteria an Approach to
Sustainable Food Security |
title_fullStr | Molecular Identification of Lactic Acid Bacteria an Approach to
Sustainable Food Security |
title_full_unstemmed | Molecular Identification of Lactic Acid Bacteria an Approach to
Sustainable Food Security |
title_short | Molecular Identification of Lactic Acid Bacteria an Approach to
Sustainable Food Security |
title_sort | molecular identification of lactic acid bacteria an approach to
sustainable food security |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9131486/ https://www.ncbi.nlm.nih.gov/pubmed/34818881 http://dx.doi.org/10.4081/jphr.2021.2508 |
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