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Efficient Liver Segmentation from Computed Tomography Images Using Deep Learning

Segmentation of a liver in computed tomography (CT) images is an important step toward quantitative biomarkers for a computer-aided decision support system and precise medical diagnosis. To overcome the difficulties that come across the liver segmentation that are affected by fuzzy boundaries, stack...

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Autores principales: Ahmad, Mubashir, Qadri, Syed Furqan, Ashraf, M. Usman, Subhi, Khalid, Khan, Salabat, Zareen, Syeda Shamaila, Qadri, Salman
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9132625/
https://www.ncbi.nlm.nih.gov/pubmed/35634046
http://dx.doi.org/10.1155/2022/2665283
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author Ahmad, Mubashir
Qadri, Syed Furqan
Ashraf, M. Usman
Subhi, Khalid
Khan, Salabat
Zareen, Syeda Shamaila
Qadri, Salman
author_facet Ahmad, Mubashir
Qadri, Syed Furqan
Ashraf, M. Usman
Subhi, Khalid
Khan, Salabat
Zareen, Syeda Shamaila
Qadri, Salman
author_sort Ahmad, Mubashir
collection PubMed
description Segmentation of a liver in computed tomography (CT) images is an important step toward quantitative biomarkers for a computer-aided decision support system and precise medical diagnosis. To overcome the difficulties that come across the liver segmentation that are affected by fuzzy boundaries, stacked autoencoder (SAE) is applied to learn the most discriminative features of the liver among other tissues in abdominal images. In this paper, we propose a patch-based deep learning method for the segmentation of a liver from CT images using SAE. Unlike the traditional machine learning methods, instead of anticipating pixel by pixel learning, our algorithm utilizes the patches to learn the representations and identify the liver area. We preprocessed the whole dataset to get the enhanced images and converted each image into many overlapping patches. These patches are given as input to SAE for unsupervised feature learning. Finally, the learned features with labels of the images are fine tuned, and the classification is performed to develop the probability map in a supervised way. Experimental results demonstrate that our proposed algorithm shows satisfactory results on test images. Our method achieved a 96.47% dice similarity coefficient (DSC), which is better than other methods in the same domain.
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spelling pubmed-91326252022-05-26 Efficient Liver Segmentation from Computed Tomography Images Using Deep Learning Ahmad, Mubashir Qadri, Syed Furqan Ashraf, M. Usman Subhi, Khalid Khan, Salabat Zareen, Syeda Shamaila Qadri, Salman Comput Intell Neurosci Research Article Segmentation of a liver in computed tomography (CT) images is an important step toward quantitative biomarkers for a computer-aided decision support system and precise medical diagnosis. To overcome the difficulties that come across the liver segmentation that are affected by fuzzy boundaries, stacked autoencoder (SAE) is applied to learn the most discriminative features of the liver among other tissues in abdominal images. In this paper, we propose a patch-based deep learning method for the segmentation of a liver from CT images using SAE. Unlike the traditional machine learning methods, instead of anticipating pixel by pixel learning, our algorithm utilizes the patches to learn the representations and identify the liver area. We preprocessed the whole dataset to get the enhanced images and converted each image into many overlapping patches. These patches are given as input to SAE for unsupervised feature learning. Finally, the learned features with labels of the images are fine tuned, and the classification is performed to develop the probability map in a supervised way. Experimental results demonstrate that our proposed algorithm shows satisfactory results on test images. Our method achieved a 96.47% dice similarity coefficient (DSC), which is better than other methods in the same domain. Hindawi 2022-05-18 /pmc/articles/PMC9132625/ /pubmed/35634046 http://dx.doi.org/10.1155/2022/2665283 Text en Copyright © 2022 Mubashir Ahmad et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Ahmad, Mubashir
Qadri, Syed Furqan
Ashraf, M. Usman
Subhi, Khalid
Khan, Salabat
Zareen, Syeda Shamaila
Qadri, Salman
Efficient Liver Segmentation from Computed Tomography Images Using Deep Learning
title Efficient Liver Segmentation from Computed Tomography Images Using Deep Learning
title_full Efficient Liver Segmentation from Computed Tomography Images Using Deep Learning
title_fullStr Efficient Liver Segmentation from Computed Tomography Images Using Deep Learning
title_full_unstemmed Efficient Liver Segmentation from Computed Tomography Images Using Deep Learning
title_short Efficient Liver Segmentation from Computed Tomography Images Using Deep Learning
title_sort efficient liver segmentation from computed tomography images using deep learning
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9132625/
https://www.ncbi.nlm.nih.gov/pubmed/35634046
http://dx.doi.org/10.1155/2022/2665283
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