Cargando…

Comprehensive Analysis of RELL2 as a Potential Biomarker Associated with Tumor Immune Infiltrating Cells in a Pan-Cancer Analysis

BACKGROUND: Receptor expressed in lymphoid tissues-like 2 (RELL2), which is a member of RELT family, is closely associated with the plasma membrane and acts as a modulator for RELT signaling. Overexpression of RELL2 induces the activation of MAPK14/p38 cascade and apoptosis. However, whether RELL2 c...

Descripción completa

Detalles Bibliográficos
Autores principales: Musha, Kadeerjiang, Ge, Xinqi, Ablikim, Nuraliya, Lu, Bing, Chen, Chen, Huang, Jianfei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9132657/
https://www.ncbi.nlm.nih.gov/pubmed/35634441
http://dx.doi.org/10.1155/2022/5009512
_version_ 1784713426498486272
author Musha, Kadeerjiang
Ge, Xinqi
Ablikim, Nuraliya
Lu, Bing
Chen, Chen
Huang, Jianfei
author_facet Musha, Kadeerjiang
Ge, Xinqi
Ablikim, Nuraliya
Lu, Bing
Chen, Chen
Huang, Jianfei
author_sort Musha, Kadeerjiang
collection PubMed
description BACKGROUND: Receptor expressed in lymphoid tissues-like 2 (RELL2), which is a member of RELT family, is closely associated with the plasma membrane and acts as a modulator for RELT signaling. Overexpression of RELL2 induces the activation of MAPK14/p38 cascade and apoptosis. However, whether RELL2 contributes to cancers remains unclear. Here, we examined its role in cancer patient prognosis and various tumors. METHODS: We used several bioinformatics methods, specifically gene set enrichment analysis (GSEA), ScanNeo, and ESTIMATE, to analyze the CCLE dataset, GTEx dataset, and TCGA dataset. We investigated the possible association of RELL2 with the microsatellite instability (MSI) of various tumors, tumor mutational burden (TMB), immune checkpoint, immune neoantigens, immune microenvironment, and patient prognosis. RESULT: RELL2 is highly expressed in cancer compared with normal tissues. RELL2 expression is linked with worse progression-free interval and overall survival in numerous cancers. In most cancers, high RELL2 expression was related to a poor prognosis. RELL2 expression was significantly associated with the tumor microenvironment, MSI, and TMB. RELL2 expression is strongly associated with phenotypes that are of major clinical significance, particularly those associated with immune neoantigens and the expression profiles of immune checkpoint genes in pan-cancer. RELL2 expression strongly linked with the expressions of methyltransferases and DNA repair genes. It also significantly correlated with multiple signaling pathways through gene set enrichment analysis. CONCLUSION: RELL2 may be a prognostic biomarker in pan-cancer and may have an important function in tumorigenesis and progression.
format Online
Article
Text
id pubmed-9132657
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-91326572022-05-26 Comprehensive Analysis of RELL2 as a Potential Biomarker Associated with Tumor Immune Infiltrating Cells in a Pan-Cancer Analysis Musha, Kadeerjiang Ge, Xinqi Ablikim, Nuraliya Lu, Bing Chen, Chen Huang, Jianfei Dis Markers Research Article BACKGROUND: Receptor expressed in lymphoid tissues-like 2 (RELL2), which is a member of RELT family, is closely associated with the plasma membrane and acts as a modulator for RELT signaling. Overexpression of RELL2 induces the activation of MAPK14/p38 cascade and apoptosis. However, whether RELL2 contributes to cancers remains unclear. Here, we examined its role in cancer patient prognosis and various tumors. METHODS: We used several bioinformatics methods, specifically gene set enrichment analysis (GSEA), ScanNeo, and ESTIMATE, to analyze the CCLE dataset, GTEx dataset, and TCGA dataset. We investigated the possible association of RELL2 with the microsatellite instability (MSI) of various tumors, tumor mutational burden (TMB), immune checkpoint, immune neoantigens, immune microenvironment, and patient prognosis. RESULT: RELL2 is highly expressed in cancer compared with normal tissues. RELL2 expression is linked with worse progression-free interval and overall survival in numerous cancers. In most cancers, high RELL2 expression was related to a poor prognosis. RELL2 expression was significantly associated with the tumor microenvironment, MSI, and TMB. RELL2 expression is strongly associated with phenotypes that are of major clinical significance, particularly those associated with immune neoantigens and the expression profiles of immune checkpoint genes in pan-cancer. RELL2 expression strongly linked with the expressions of methyltransferases and DNA repair genes. It also significantly correlated with multiple signaling pathways through gene set enrichment analysis. CONCLUSION: RELL2 may be a prognostic biomarker in pan-cancer and may have an important function in tumorigenesis and progression. Hindawi 2022-05-18 /pmc/articles/PMC9132657/ /pubmed/35634441 http://dx.doi.org/10.1155/2022/5009512 Text en Copyright © 2022 Kadeerjiang Musha et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Musha, Kadeerjiang
Ge, Xinqi
Ablikim, Nuraliya
Lu, Bing
Chen, Chen
Huang, Jianfei
Comprehensive Analysis of RELL2 as a Potential Biomarker Associated with Tumor Immune Infiltrating Cells in a Pan-Cancer Analysis
title Comprehensive Analysis of RELL2 as a Potential Biomarker Associated with Tumor Immune Infiltrating Cells in a Pan-Cancer Analysis
title_full Comprehensive Analysis of RELL2 as a Potential Biomarker Associated with Tumor Immune Infiltrating Cells in a Pan-Cancer Analysis
title_fullStr Comprehensive Analysis of RELL2 as a Potential Biomarker Associated with Tumor Immune Infiltrating Cells in a Pan-Cancer Analysis
title_full_unstemmed Comprehensive Analysis of RELL2 as a Potential Biomarker Associated with Tumor Immune Infiltrating Cells in a Pan-Cancer Analysis
title_short Comprehensive Analysis of RELL2 as a Potential Biomarker Associated with Tumor Immune Infiltrating Cells in a Pan-Cancer Analysis
title_sort comprehensive analysis of rell2 as a potential biomarker associated with tumor immune infiltrating cells in a pan-cancer analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9132657/
https://www.ncbi.nlm.nih.gov/pubmed/35634441
http://dx.doi.org/10.1155/2022/5009512
work_keys_str_mv AT mushakadeerjiang comprehensiveanalysisofrell2asapotentialbiomarkerassociatedwithtumorimmuneinfiltratingcellsinapancanceranalysis
AT gexinqi comprehensiveanalysisofrell2asapotentialbiomarkerassociatedwithtumorimmuneinfiltratingcellsinapancanceranalysis
AT ablikimnuraliya comprehensiveanalysisofrell2asapotentialbiomarkerassociatedwithtumorimmuneinfiltratingcellsinapancanceranalysis
AT lubing comprehensiveanalysisofrell2asapotentialbiomarkerassociatedwithtumorimmuneinfiltratingcellsinapancanceranalysis
AT chenchen comprehensiveanalysisofrell2asapotentialbiomarkerassociatedwithtumorimmuneinfiltratingcellsinapancanceranalysis
AT huangjianfei comprehensiveanalysisofrell2asapotentialbiomarkerassociatedwithtumorimmuneinfiltratingcellsinapancanceranalysis