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Local Label Point Correction for Edge Detection of Overlapping Cervical Cells

Accurate labeling is essential for supervised deep learning methods. However, it is almost impossible to accurately and manually annotate thousands of images, which results in many labeling errors for most datasets. We proposes a local label point correction (LLPC) method to improve annotation quali...

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Autores principales: Liu, Jiawei, Fan, Huijie, Wang, Qiang, Li, Wentao, Tang, Yandong, Wang, Danbo, Zhou, Mingyi, Chen, Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9133536/
https://www.ncbi.nlm.nih.gov/pubmed/35645753
http://dx.doi.org/10.3389/fninf.2022.895290
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author Liu, Jiawei
Fan, Huijie
Wang, Qiang
Li, Wentao
Tang, Yandong
Wang, Danbo
Zhou, Mingyi
Chen, Li
author_facet Liu, Jiawei
Fan, Huijie
Wang, Qiang
Li, Wentao
Tang, Yandong
Wang, Danbo
Zhou, Mingyi
Chen, Li
author_sort Liu, Jiawei
collection PubMed
description Accurate labeling is essential for supervised deep learning methods. However, it is almost impossible to accurately and manually annotate thousands of images, which results in many labeling errors for most datasets. We proposes a local label point correction (LLPC) method to improve annotation quality for edge detection and image segmentation tasks. Our algorithm contains three steps: gradient-guided point correction, point interpolation, and local point smoothing. We correct the labels of object contours by moving the annotated points to the pixel gradient peaks. This can improve the edge localization accuracy, but it also causes unsmooth contours due to the interference of image noise. Therefore, we design a point smoothing method based on local linear fitting to smooth the corrected edge. To verify the effectiveness of our LLPC, we construct a largest overlapping cervical cell edge detection dataset (CCEDD) with higher precision label corrected by our label correction method. Our LLPC only needs to set three parameters, but yields 30–40% average precision improvement on multiple networks. The qualitative and quantitative experimental results show that our LLPC can improve the quality of manual labels and the accuracy of overlapping cell edge detection. We hope that our study will give a strong boost to the development of the label correction for edge detection and image segmentation. We will release the dataset and code at: https://github.com/nachifur/LLPC.
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spelling pubmed-91335362022-05-27 Local Label Point Correction for Edge Detection of Overlapping Cervical Cells Liu, Jiawei Fan, Huijie Wang, Qiang Li, Wentao Tang, Yandong Wang, Danbo Zhou, Mingyi Chen, Li Front Neuroinform Neuroscience Accurate labeling is essential for supervised deep learning methods. However, it is almost impossible to accurately and manually annotate thousands of images, which results in many labeling errors for most datasets. We proposes a local label point correction (LLPC) method to improve annotation quality for edge detection and image segmentation tasks. Our algorithm contains three steps: gradient-guided point correction, point interpolation, and local point smoothing. We correct the labels of object contours by moving the annotated points to the pixel gradient peaks. This can improve the edge localization accuracy, but it also causes unsmooth contours due to the interference of image noise. Therefore, we design a point smoothing method based on local linear fitting to smooth the corrected edge. To verify the effectiveness of our LLPC, we construct a largest overlapping cervical cell edge detection dataset (CCEDD) with higher precision label corrected by our label correction method. Our LLPC only needs to set three parameters, but yields 30–40% average precision improvement on multiple networks. The qualitative and quantitative experimental results show that our LLPC can improve the quality of manual labels and the accuracy of overlapping cell edge detection. We hope that our study will give a strong boost to the development of the label correction for edge detection and image segmentation. We will release the dataset and code at: https://github.com/nachifur/LLPC. Frontiers Media S.A. 2022-05-12 /pmc/articles/PMC9133536/ /pubmed/35645753 http://dx.doi.org/10.3389/fninf.2022.895290 Text en Copyright © 2022 Liu, Fan, Wang, Li, Tang, Wang, Zhou and Chen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Liu, Jiawei
Fan, Huijie
Wang, Qiang
Li, Wentao
Tang, Yandong
Wang, Danbo
Zhou, Mingyi
Chen, Li
Local Label Point Correction for Edge Detection of Overlapping Cervical Cells
title Local Label Point Correction for Edge Detection of Overlapping Cervical Cells
title_full Local Label Point Correction for Edge Detection of Overlapping Cervical Cells
title_fullStr Local Label Point Correction for Edge Detection of Overlapping Cervical Cells
title_full_unstemmed Local Label Point Correction for Edge Detection of Overlapping Cervical Cells
title_short Local Label Point Correction for Edge Detection of Overlapping Cervical Cells
title_sort local label point correction for edge detection of overlapping cervical cells
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9133536/
https://www.ncbi.nlm.nih.gov/pubmed/35645753
http://dx.doi.org/10.3389/fninf.2022.895290
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