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Analysis of the Expression and Role of Keratin 17 in Human Tumors
Objective: We aimed to explore the expression and carcinogenic effect of KRT17 in human tumors and provide useful information for the study of KRT17. Methods: We used databases including the Cancer Genome Atlas, Gene Expression Omnibus, GTEx, and GEPIA2 to analyze the expression, mutation, and progn...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9133940/ https://www.ncbi.nlm.nih.gov/pubmed/35646078 http://dx.doi.org/10.3389/fgene.2022.801698 |
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author | Zhang, Hanqun Zhang, Yun Feng, Zhiyu Lu, Liang Li, Yong Liu, Yuncong Chen, Yanping |
author_facet | Zhang, Hanqun Zhang, Yun Feng, Zhiyu Lu, Liang Li, Yong Liu, Yuncong Chen, Yanping |
author_sort | Zhang, Hanqun |
collection | PubMed |
description | Objective: We aimed to explore the expression and carcinogenic effect of KRT17 in human tumors and provide useful information for the study of KRT17. Methods: We used databases including the Cancer Genome Atlas, Gene Expression Omnibus, GTEx, and GEPIA2 to analyze the expression, mutation, and prognosis of KRT17 in human tumors. Through webservers, including UALCAN, TIMER2.0, and STRING, we learned about the genetic variation, immune cell penetration, and enrichment analysis of KRT17-related genes. Results: KRT17 was highly expressed in most tumors (such as esophageal cancer, lung cancer, cervical cancer, etc.), and the high expression level correlated with tumor stage and prognosis. In addition, amplification was the main type of KRT17 tumor variation, with an amplification rate of about 9%, followed by mutation, with a mutation rate of 4%. Moreover, KRT17 was strongly associated with tumor-infiltrating immune cells (such as macrophages, CD8+T, Tregs, and cancer-associated fibroblasts). KEGG analysis suggested that KRT17 may play a role in tumor pathogenesis following human papillomavirus infection, and the gene ontology enrichment analysis indicated that the carcinogenicity of KRT17 can be attributed to cadherin binding, intermediate fibrocytoskeleton and epidermal development. Conclusion: KRT17 may play an important role in the occurrence, development, and prognosis of malignant tumors. We provided a relatively comprehensive description of the carcinogenic role of KRT17 in different tumors for the first time. |
format | Online Article Text |
id | pubmed-9133940 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91339402022-05-27 Analysis of the Expression and Role of Keratin 17 in Human Tumors Zhang, Hanqun Zhang, Yun Feng, Zhiyu Lu, Liang Li, Yong Liu, Yuncong Chen, Yanping Front Genet Genetics Objective: We aimed to explore the expression and carcinogenic effect of KRT17 in human tumors and provide useful information for the study of KRT17. Methods: We used databases including the Cancer Genome Atlas, Gene Expression Omnibus, GTEx, and GEPIA2 to analyze the expression, mutation, and prognosis of KRT17 in human tumors. Through webservers, including UALCAN, TIMER2.0, and STRING, we learned about the genetic variation, immune cell penetration, and enrichment analysis of KRT17-related genes. Results: KRT17 was highly expressed in most tumors (such as esophageal cancer, lung cancer, cervical cancer, etc.), and the high expression level correlated with tumor stage and prognosis. In addition, amplification was the main type of KRT17 tumor variation, with an amplification rate of about 9%, followed by mutation, with a mutation rate of 4%. Moreover, KRT17 was strongly associated with tumor-infiltrating immune cells (such as macrophages, CD8+T, Tregs, and cancer-associated fibroblasts). KEGG analysis suggested that KRT17 may play a role in tumor pathogenesis following human papillomavirus infection, and the gene ontology enrichment analysis indicated that the carcinogenicity of KRT17 can be attributed to cadherin binding, intermediate fibrocytoskeleton and epidermal development. Conclusion: KRT17 may play an important role in the occurrence, development, and prognosis of malignant tumors. We provided a relatively comprehensive description of the carcinogenic role of KRT17 in different tumors for the first time. Frontiers Media S.A. 2022-05-12 /pmc/articles/PMC9133940/ /pubmed/35646078 http://dx.doi.org/10.3389/fgene.2022.801698 Text en Copyright © 2022 Zhang, Zhang, Feng, Lu, Li, Liu and Chen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Zhang, Hanqun Zhang, Yun Feng, Zhiyu Lu, Liang Li, Yong Liu, Yuncong Chen, Yanping Analysis of the Expression and Role of Keratin 17 in Human Tumors |
title | Analysis of the Expression and Role of Keratin 17 in Human Tumors |
title_full | Analysis of the Expression and Role of Keratin 17 in Human Tumors |
title_fullStr | Analysis of the Expression and Role of Keratin 17 in Human Tumors |
title_full_unstemmed | Analysis of the Expression and Role of Keratin 17 in Human Tumors |
title_short | Analysis of the Expression and Role of Keratin 17 in Human Tumors |
title_sort | analysis of the expression and role of keratin 17 in human tumors |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9133940/ https://www.ncbi.nlm.nih.gov/pubmed/35646078 http://dx.doi.org/10.3389/fgene.2022.801698 |
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