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Biocatalytic quantification of α‐glucan in marine particulate organic matter
Marine algae drive the marine carbon cycle, converting carbon dioxide into organic material. A major component of this produced biomass is a variety of glycans. Marine α‐glucans include a range of storage glycans from red and green algae, bacteria, fungi, and animals. Although these compounds are li...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9134812/ https://www.ncbi.nlm.nih.gov/pubmed/35765187 http://dx.doi.org/10.1002/mbo3.1289 |
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author | Steinke, Nicola Vidal‐Melgosa, Silvia Schultz‐Johansen, Mikkel Hehemann, Jan‐Hendrik |
author_facet | Steinke, Nicola Vidal‐Melgosa, Silvia Schultz‐Johansen, Mikkel Hehemann, Jan‐Hendrik |
author_sort | Steinke, Nicola |
collection | PubMed |
description | Marine algae drive the marine carbon cycle, converting carbon dioxide into organic material. A major component of this produced biomass is a variety of glycans. Marine α‐glucans include a range of storage glycans from red and green algae, bacteria, fungi, and animals. Although these compounds are likely to account for a high amount of the carbon stored in the oceans they have not been quantified in marine samples so far. Here we present a method to extract and quantify α‐glucans (and compare it with the β‐glucan laminarin) in particulate organic matter from algal cultures and environmental samples using sequential physicochemical extraction and enzymes as α‐glucan‐specific probes. This enzymatic assay is more specific and less susceptible to side reactions than chemical hydrolysis. Using HPAEC‐PAD to detect the hydrolysis products allows for a glycan quantification in particulate marine samples down to a concentration of ≈2 µg/L. We measured glucans in three cultured microalgae as well as in marine particulate organic matter from the North Sea and western North Atlantic Ocean. While the β‐glucan laminarin from diatoms and brown algae is an essential component of marine carbon turnover, our results further indicate the significant contribution of starch‐like α‐glucans to marine particulate organic matter. Henceforth, the combination of glycan‐linkage‐specific enzymes and chromatographic hydrolysis product detection can provide a powerful tool in the exploration of marine glycans and their role in the global carbon cycle. |
format | Online Article Text |
id | pubmed-9134812 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91348122022-06-04 Biocatalytic quantification of α‐glucan in marine particulate organic matter Steinke, Nicola Vidal‐Melgosa, Silvia Schultz‐Johansen, Mikkel Hehemann, Jan‐Hendrik Microbiologyopen Original Articles Marine algae drive the marine carbon cycle, converting carbon dioxide into organic material. A major component of this produced biomass is a variety of glycans. Marine α‐glucans include a range of storage glycans from red and green algae, bacteria, fungi, and animals. Although these compounds are likely to account for a high amount of the carbon stored in the oceans they have not been quantified in marine samples so far. Here we present a method to extract and quantify α‐glucans (and compare it with the β‐glucan laminarin) in particulate organic matter from algal cultures and environmental samples using sequential physicochemical extraction and enzymes as α‐glucan‐specific probes. This enzymatic assay is more specific and less susceptible to side reactions than chemical hydrolysis. Using HPAEC‐PAD to detect the hydrolysis products allows for a glycan quantification in particulate marine samples down to a concentration of ≈2 µg/L. We measured glucans in three cultured microalgae as well as in marine particulate organic matter from the North Sea and western North Atlantic Ocean. While the β‐glucan laminarin from diatoms and brown algae is an essential component of marine carbon turnover, our results further indicate the significant contribution of starch‐like α‐glucans to marine particulate organic matter. Henceforth, the combination of glycan‐linkage‐specific enzymes and chromatographic hydrolysis product detection can provide a powerful tool in the exploration of marine glycans and their role in the global carbon cycle. John Wiley and Sons Inc. 2022-05-26 /pmc/articles/PMC9134812/ /pubmed/35765187 http://dx.doi.org/10.1002/mbo3.1289 Text en © 2022 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Steinke, Nicola Vidal‐Melgosa, Silvia Schultz‐Johansen, Mikkel Hehemann, Jan‐Hendrik Biocatalytic quantification of α‐glucan in marine particulate organic matter |
title | Biocatalytic quantification of α‐glucan in marine particulate organic matter |
title_full | Biocatalytic quantification of α‐glucan in marine particulate organic matter |
title_fullStr | Biocatalytic quantification of α‐glucan in marine particulate organic matter |
title_full_unstemmed | Biocatalytic quantification of α‐glucan in marine particulate organic matter |
title_short | Biocatalytic quantification of α‐glucan in marine particulate organic matter |
title_sort | biocatalytic quantification of α‐glucan in marine particulate organic matter |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9134812/ https://www.ncbi.nlm.nih.gov/pubmed/35765187 http://dx.doi.org/10.1002/mbo3.1289 |
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