Cargando…
Post-Radiotherapy PET Image Outcome Prediction by Deep Learning Under Biological Model Guidance: A Feasibility Study of Oropharyngeal Cancer Application
PURPOSE: To develop a method of biologically guided deep learning for post-radiation (18)FDG-PET image outcome prediction based on pre-radiation images and radiotherapy dose information. METHODS: Based on the classic reaction–diffusion mechanism, a novel biological model was proposed using a partial...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9135979/ https://www.ncbi.nlm.nih.gov/pubmed/35646643 http://dx.doi.org/10.3389/fonc.2022.895544 |
_version_ | 1784714073719439360 |
---|---|
author | Ji, Hangjie Lafata, Kyle Mowery, Yvonne Brizel, David Bertozzi, Andrea L. Yin, Fang-Fang Wang, Chunhao |
author_facet | Ji, Hangjie Lafata, Kyle Mowery, Yvonne Brizel, David Bertozzi, Andrea L. Yin, Fang-Fang Wang, Chunhao |
author_sort | Ji, Hangjie |
collection | PubMed |
description | PURPOSE: To develop a method of biologically guided deep learning for post-radiation (18)FDG-PET image outcome prediction based on pre-radiation images and radiotherapy dose information. METHODS: Based on the classic reaction–diffusion mechanism, a novel biological model was proposed using a partial differential equation that incorporates spatial radiation dose distribution as a patient-specific treatment information variable. A 7-layer encoder–decoder-based convolutional neural network (CNN) was designed and trained to learn the proposed biological model. As such, the model could generate post-radiation (18)FDG-PET image outcome predictions with breakdown biological components for enhanced explainability. The proposed method was developed using 64 oropharyngeal patients with paired (18)FDG-PET studies before and after 20-Gy delivery (2 Gy/day fraction) by intensity-modulated radiotherapy (IMRT). In a two-branch deep learning execution, the proposed CNN learns specific terms in the biological model from paired (18)FDG-PET images and spatial dose distribution in one branch, and the biological model generates post-20-Gy (18)FDG-PET image prediction in the other branch. As in 2D execution, 718/233/230 axial slices from 38/13/13 patients were used for training/validation/independent test. The prediction image results in test cases were compared with the ground-truth results quantitatively. RESULTS: The proposed method successfully generated post-20-Gy (18)FDG-PET image outcome prediction with breakdown illustrations of biological model components. Standardized uptake value (SUV) mean values in (18)FDG high-uptake regions of predicted images (2.45 ± 0.25) were similar to ground-truth results (2.51 ± 0.33). In 2D-based Gamma analysis, the median/mean Gamma Index (<1) passing rate of test images was 96.5%/92.8% using the 5%/5 mm criterion; such result was improved to 99.9%/99.6% when 10%/10 mm was adopted. CONCLUSION: The developed biologically guided deep learning method achieved post-20-Gy (18)FDG-PET image outcome predictions in good agreement with ground-truth results. With the breakdown biological modeling components, the outcome image predictions could be used in adaptive radiotherapy decision-making to optimize personalized plans for the best outcome in the future. |
format | Online Article Text |
id | pubmed-9135979 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91359792022-05-28 Post-Radiotherapy PET Image Outcome Prediction by Deep Learning Under Biological Model Guidance: A Feasibility Study of Oropharyngeal Cancer Application Ji, Hangjie Lafata, Kyle Mowery, Yvonne Brizel, David Bertozzi, Andrea L. Yin, Fang-Fang Wang, Chunhao Front Oncol Oncology PURPOSE: To develop a method of biologically guided deep learning for post-radiation (18)FDG-PET image outcome prediction based on pre-radiation images and radiotherapy dose information. METHODS: Based on the classic reaction–diffusion mechanism, a novel biological model was proposed using a partial differential equation that incorporates spatial radiation dose distribution as a patient-specific treatment information variable. A 7-layer encoder–decoder-based convolutional neural network (CNN) was designed and trained to learn the proposed biological model. As such, the model could generate post-radiation (18)FDG-PET image outcome predictions with breakdown biological components for enhanced explainability. The proposed method was developed using 64 oropharyngeal patients with paired (18)FDG-PET studies before and after 20-Gy delivery (2 Gy/day fraction) by intensity-modulated radiotherapy (IMRT). In a two-branch deep learning execution, the proposed CNN learns specific terms in the biological model from paired (18)FDG-PET images and spatial dose distribution in one branch, and the biological model generates post-20-Gy (18)FDG-PET image prediction in the other branch. As in 2D execution, 718/233/230 axial slices from 38/13/13 patients were used for training/validation/independent test. The prediction image results in test cases were compared with the ground-truth results quantitatively. RESULTS: The proposed method successfully generated post-20-Gy (18)FDG-PET image outcome prediction with breakdown illustrations of biological model components. Standardized uptake value (SUV) mean values in (18)FDG high-uptake regions of predicted images (2.45 ± 0.25) were similar to ground-truth results (2.51 ± 0.33). In 2D-based Gamma analysis, the median/mean Gamma Index (<1) passing rate of test images was 96.5%/92.8% using the 5%/5 mm criterion; such result was improved to 99.9%/99.6% when 10%/10 mm was adopted. CONCLUSION: The developed biologically guided deep learning method achieved post-20-Gy (18)FDG-PET image outcome predictions in good agreement with ground-truth results. With the breakdown biological modeling components, the outcome image predictions could be used in adaptive radiotherapy decision-making to optimize personalized plans for the best outcome in the future. Frontiers Media S.A. 2022-05-13 /pmc/articles/PMC9135979/ /pubmed/35646643 http://dx.doi.org/10.3389/fonc.2022.895544 Text en Copyright © 2022 Ji, Lafata, Mowery, Brizel, Bertozzi, Yin and Wang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Ji, Hangjie Lafata, Kyle Mowery, Yvonne Brizel, David Bertozzi, Andrea L. Yin, Fang-Fang Wang, Chunhao Post-Radiotherapy PET Image Outcome Prediction by Deep Learning Under Biological Model Guidance: A Feasibility Study of Oropharyngeal Cancer Application |
title | Post-Radiotherapy PET Image Outcome Prediction by Deep Learning Under Biological Model Guidance: A Feasibility Study of Oropharyngeal Cancer Application |
title_full | Post-Radiotherapy PET Image Outcome Prediction by Deep Learning Under Biological Model Guidance: A Feasibility Study of Oropharyngeal Cancer Application |
title_fullStr | Post-Radiotherapy PET Image Outcome Prediction by Deep Learning Under Biological Model Guidance: A Feasibility Study of Oropharyngeal Cancer Application |
title_full_unstemmed | Post-Radiotherapy PET Image Outcome Prediction by Deep Learning Under Biological Model Guidance: A Feasibility Study of Oropharyngeal Cancer Application |
title_short | Post-Radiotherapy PET Image Outcome Prediction by Deep Learning Under Biological Model Guidance: A Feasibility Study of Oropharyngeal Cancer Application |
title_sort | post-radiotherapy pet image outcome prediction by deep learning under biological model guidance: a feasibility study of oropharyngeal cancer application |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9135979/ https://www.ncbi.nlm.nih.gov/pubmed/35646643 http://dx.doi.org/10.3389/fonc.2022.895544 |
work_keys_str_mv | AT jihangjie postradiotherapypetimageoutcomepredictionbydeeplearningunderbiologicalmodelguidanceafeasibilitystudyoforopharyngealcancerapplication AT lafatakyle postradiotherapypetimageoutcomepredictionbydeeplearningunderbiologicalmodelguidanceafeasibilitystudyoforopharyngealcancerapplication AT moweryyvonne postradiotherapypetimageoutcomepredictionbydeeplearningunderbiologicalmodelguidanceafeasibilitystudyoforopharyngealcancerapplication AT brizeldavid postradiotherapypetimageoutcomepredictionbydeeplearningunderbiologicalmodelguidanceafeasibilitystudyoforopharyngealcancerapplication AT bertozziandreal postradiotherapypetimageoutcomepredictionbydeeplearningunderbiologicalmodelguidanceafeasibilitystudyoforopharyngealcancerapplication AT yinfangfang postradiotherapypetimageoutcomepredictionbydeeplearningunderbiologicalmodelguidanceafeasibilitystudyoforopharyngealcancerapplication AT wangchunhao postradiotherapypetimageoutcomepredictionbydeeplearningunderbiologicalmodelguidanceafeasibilitystudyoforopharyngealcancerapplication |