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3D FRN-ResNet: An Automated Major Depressive Disorder Structural Magnetic Resonance Imaging Data Identification Framework
Major Depressive Disorder (MDD) is the most prevalent psychiatric disorder, seriously affecting people’s quality of life. Manually identifying MDD from structural magnetic resonance imaging (sMRI) images is laborious and time-consuming due to the lack of clear physiological indicators. With the deve...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9136074/ https://www.ncbi.nlm.nih.gov/pubmed/35645776 http://dx.doi.org/10.3389/fnagi.2022.912283 |
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author | Hong, Jialin Huang, Yueqi Ye, Jianming Wang, Jianqing Xu, Xiaomei Wu, Yan Li, Yi Zhao, Jialu Li, Ruipeng Kang, Junlong Lai, Xiaobo |
author_facet | Hong, Jialin Huang, Yueqi Ye, Jianming Wang, Jianqing Xu, Xiaomei Wu, Yan Li, Yi Zhao, Jialu Li, Ruipeng Kang, Junlong Lai, Xiaobo |
author_sort | Hong, Jialin |
collection | PubMed |
description | Major Depressive Disorder (MDD) is the most prevalent psychiatric disorder, seriously affecting people’s quality of life. Manually identifying MDD from structural magnetic resonance imaging (sMRI) images is laborious and time-consuming due to the lack of clear physiological indicators. With the development of deep learning, many automated identification methods have been developed, but most of them stay in 2D images, resulting in poor performance. In addition, the heterogeneity of MDD also results in slightly different changes reflected in patients’ brain imaging, which constitutes a barrier to the study of MDD identification based on brain sMRI images. We propose an automated MDD identification framework in sMRI data (3D FRN-ResNet) to comprehensively address these challenges, which uses 3D-ResNet to extract features and reconstruct them based on feature maps. Notably, the 3D FRN-ResNet fully exploits the interlayer structure information in 3D sMRI data and preserves most of the spatial details as well as the location information when converting the extracted features into vectors. Furthermore, our model solves the feature map reconstruction problem in closed form to produce a straightforward and efficient classifier and dramatically improves model performance. We evaluate our framework on a private brain sMRI dataset of MDD patients. Experimental results show that the proposed model exhibits promising performance and outperforms the typical other methods, achieving the accuracy, recall, precision, and F1 values of 0.86776, 0.84237, 0.85333, and 0.84781, respectively. |
format | Online Article Text |
id | pubmed-9136074 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91360742022-05-28 3D FRN-ResNet: An Automated Major Depressive Disorder Structural Magnetic Resonance Imaging Data Identification Framework Hong, Jialin Huang, Yueqi Ye, Jianming Wang, Jianqing Xu, Xiaomei Wu, Yan Li, Yi Zhao, Jialu Li, Ruipeng Kang, Junlong Lai, Xiaobo Front Aging Neurosci Neuroscience Major Depressive Disorder (MDD) is the most prevalent psychiatric disorder, seriously affecting people’s quality of life. Manually identifying MDD from structural magnetic resonance imaging (sMRI) images is laborious and time-consuming due to the lack of clear physiological indicators. With the development of deep learning, many automated identification methods have been developed, but most of them stay in 2D images, resulting in poor performance. In addition, the heterogeneity of MDD also results in slightly different changes reflected in patients’ brain imaging, which constitutes a barrier to the study of MDD identification based on brain sMRI images. We propose an automated MDD identification framework in sMRI data (3D FRN-ResNet) to comprehensively address these challenges, which uses 3D-ResNet to extract features and reconstruct them based on feature maps. Notably, the 3D FRN-ResNet fully exploits the interlayer structure information in 3D sMRI data and preserves most of the spatial details as well as the location information when converting the extracted features into vectors. Furthermore, our model solves the feature map reconstruction problem in closed form to produce a straightforward and efficient classifier and dramatically improves model performance. We evaluate our framework on a private brain sMRI dataset of MDD patients. Experimental results show that the proposed model exhibits promising performance and outperforms the typical other methods, achieving the accuracy, recall, precision, and F1 values of 0.86776, 0.84237, 0.85333, and 0.84781, respectively. Frontiers Media S.A. 2022-05-13 /pmc/articles/PMC9136074/ /pubmed/35645776 http://dx.doi.org/10.3389/fnagi.2022.912283 Text en Copyright © 2022 Hong, Huang, Ye, Wang, Xu, Wu, Li, Zhao, Li, Kang and Lai. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Hong, Jialin Huang, Yueqi Ye, Jianming Wang, Jianqing Xu, Xiaomei Wu, Yan Li, Yi Zhao, Jialu Li, Ruipeng Kang, Junlong Lai, Xiaobo 3D FRN-ResNet: An Automated Major Depressive Disorder Structural Magnetic Resonance Imaging Data Identification Framework |
title | 3D FRN-ResNet: An Automated Major Depressive Disorder Structural Magnetic Resonance Imaging Data Identification Framework |
title_full | 3D FRN-ResNet: An Automated Major Depressive Disorder Structural Magnetic Resonance Imaging Data Identification Framework |
title_fullStr | 3D FRN-ResNet: An Automated Major Depressive Disorder Structural Magnetic Resonance Imaging Data Identification Framework |
title_full_unstemmed | 3D FRN-ResNet: An Automated Major Depressive Disorder Structural Magnetic Resonance Imaging Data Identification Framework |
title_short | 3D FRN-ResNet: An Automated Major Depressive Disorder Structural Magnetic Resonance Imaging Data Identification Framework |
title_sort | 3d frn-resnet: an automated major depressive disorder structural magnetic resonance imaging data identification framework |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9136074/ https://www.ncbi.nlm.nih.gov/pubmed/35645776 http://dx.doi.org/10.3389/fnagi.2022.912283 |
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