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Growth‐dependent heterogeneity in the DNA damage response in Escherichia coli
In natural environments, bacteria are frequently exposed to sub‐lethal levels of DNA damage, which leads to the induction of a stress response (the SOS response in Escherichia coli). Natural environments also vary in nutrient availability, resulting in distinct physiological changes in bacteria, whi...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9136515/ https://www.ncbi.nlm.nih.gov/pubmed/35620827 http://dx.doi.org/10.15252/msb.202110441 |
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author | Jaramillo‐Riveri, Sebastián Broughton, James McVey, Alexander Pilizota, Teuta Scott, Matthew El Karoui, Meriem |
author_facet | Jaramillo‐Riveri, Sebastián Broughton, James McVey, Alexander Pilizota, Teuta Scott, Matthew El Karoui, Meriem |
author_sort | Jaramillo‐Riveri, Sebastián |
collection | PubMed |
description | In natural environments, bacteria are frequently exposed to sub‐lethal levels of DNA damage, which leads to the induction of a stress response (the SOS response in Escherichia coli). Natural environments also vary in nutrient availability, resulting in distinct physiological changes in bacteria, which may have direct implications on their capacity to repair their chromosomes. Here, we evaluated the impact of varying the nutrient availability on the expression of the SOS response induced by chronic sub‐lethal DNA damage in E. coli. We found heterogeneous expression of the SOS regulon at the single‐cell level in all growth conditions. Surprisingly, we observed a larger fraction of high SOS‐induced cells in slow growth as compared with fast growth, despite a higher rate of SOS induction in fast growth. The result can be explained by the dynamic balance between the rate of SOS induction and the division rates of cells exposed to DNA damage. Taken together, our data illustrate how cell division and physiology come together to produce growth‐dependent heterogeneity in the DNA damage response. |
format | Online Article Text |
id | pubmed-9136515 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91365152022-06-04 Growth‐dependent heterogeneity in the DNA damage response in Escherichia coli Jaramillo‐Riveri, Sebastián Broughton, James McVey, Alexander Pilizota, Teuta Scott, Matthew El Karoui, Meriem Mol Syst Biol Articles In natural environments, bacteria are frequently exposed to sub‐lethal levels of DNA damage, which leads to the induction of a stress response (the SOS response in Escherichia coli). Natural environments also vary in nutrient availability, resulting in distinct physiological changes in bacteria, which may have direct implications on their capacity to repair their chromosomes. Here, we evaluated the impact of varying the nutrient availability on the expression of the SOS response induced by chronic sub‐lethal DNA damage in E. coli. We found heterogeneous expression of the SOS regulon at the single‐cell level in all growth conditions. Surprisingly, we observed a larger fraction of high SOS‐induced cells in slow growth as compared with fast growth, despite a higher rate of SOS induction in fast growth. The result can be explained by the dynamic balance between the rate of SOS induction and the division rates of cells exposed to DNA damage. Taken together, our data illustrate how cell division and physiology come together to produce growth‐dependent heterogeneity in the DNA damage response. John Wiley and Sons Inc. 2022-05-27 /pmc/articles/PMC9136515/ /pubmed/35620827 http://dx.doi.org/10.15252/msb.202110441 Text en © 2022 The Authors. Published under the terms of the CC BY 4.0 license https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Jaramillo‐Riveri, Sebastián Broughton, James McVey, Alexander Pilizota, Teuta Scott, Matthew El Karoui, Meriem Growth‐dependent heterogeneity in the DNA damage response in Escherichia coli |
title | Growth‐dependent heterogeneity in the DNA damage response in Escherichia coli
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title_full | Growth‐dependent heterogeneity in the DNA damage response in Escherichia coli
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title_fullStr | Growth‐dependent heterogeneity in the DNA damage response in Escherichia coli
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title_full_unstemmed | Growth‐dependent heterogeneity in the DNA damage response in Escherichia coli
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title_short | Growth‐dependent heterogeneity in the DNA damage response in Escherichia coli
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title_sort | growth‐dependent heterogeneity in the dna damage response in escherichia coli |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9136515/ https://www.ncbi.nlm.nih.gov/pubmed/35620827 http://dx.doi.org/10.15252/msb.202110441 |
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