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Clostridioides difficile Toxin B PCR Cycle Threshold as a Predictor of Toxin Testing in Stool Specimens from Hospitalized Adults

Rapid, accurate detection of Clostridioides difficile toxin may potentially be predicted by toxin B PCR cycle threshold (tcdB C(t)). We investigated the validity of this approach in an inpatient adult population. Patients who tested positive by C. difficile PCR (Cepheid GeneXpert) from December 2016...

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Autores principales: Lee, Sean, Nanda, Neha, Yamaguchi, Kenichiro, Lee, Yelim, She, Rosemary C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9137712/
https://www.ncbi.nlm.nih.gov/pubmed/35625220
http://dx.doi.org/10.3390/antibiotics11050576
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author Lee, Sean
Nanda, Neha
Yamaguchi, Kenichiro
Lee, Yelim
She, Rosemary C.
author_facet Lee, Sean
Nanda, Neha
Yamaguchi, Kenichiro
Lee, Yelim
She, Rosemary C.
author_sort Lee, Sean
collection PubMed
description Rapid, accurate detection of Clostridioides difficile toxin may potentially be predicted by toxin B PCR cycle threshold (tcdB C(t)). We investigated the validity of this approach in an inpatient adult population. Patients who tested positive by C. difficile PCR (Cepheid GeneXpert) from December 2016 to October 2020 (n = 368) at a tertiary medical center were included. All stool samples were further tested by rapid glutamate dehydrogenase (GDH)/toxin B EIA and cell cytotoxin neutralization assay (CCNA). Receiver operating characteristic curves were analyzed. The area under the curve for tcdB C(t) predicting toxin result by EIA was 0.795 (95% confidence interval (CI) 0.747–0.843) and by CCNA was 0.771 (95% CI 0.720–0.822). The Youden C(t) cutoff for CCNA was ≤27.8 cycles (sensitivity 65.0%, specificity 77.2%). For specimens with C(t) ≤ 25.0 cycles (n = 115), CCNA toxin was positive in >90%. The negative predictive value of tcdB C(t) for CCNA was no greater than 80% regardless of cutoff chosen. In summary, very low C(t) values (≤25.0) could have limited value as a rapid indicator of positive toxin status by CCNA in our patient population. A broad distribution of C(t) values for toxin-negative and toxin-positive specimens precluded more robust prediction. Additional data are needed before broader application of C(t) values from qualitatively designed assays to clinical laboratory reporting.
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spelling pubmed-91377122022-05-28 Clostridioides difficile Toxin B PCR Cycle Threshold as a Predictor of Toxin Testing in Stool Specimens from Hospitalized Adults Lee, Sean Nanda, Neha Yamaguchi, Kenichiro Lee, Yelim She, Rosemary C. Antibiotics (Basel) Article Rapid, accurate detection of Clostridioides difficile toxin may potentially be predicted by toxin B PCR cycle threshold (tcdB C(t)). We investigated the validity of this approach in an inpatient adult population. Patients who tested positive by C. difficile PCR (Cepheid GeneXpert) from December 2016 to October 2020 (n = 368) at a tertiary medical center were included. All stool samples were further tested by rapid glutamate dehydrogenase (GDH)/toxin B EIA and cell cytotoxin neutralization assay (CCNA). Receiver operating characteristic curves were analyzed. The area under the curve for tcdB C(t) predicting toxin result by EIA was 0.795 (95% confidence interval (CI) 0.747–0.843) and by CCNA was 0.771 (95% CI 0.720–0.822). The Youden C(t) cutoff for CCNA was ≤27.8 cycles (sensitivity 65.0%, specificity 77.2%). For specimens with C(t) ≤ 25.0 cycles (n = 115), CCNA toxin was positive in >90%. The negative predictive value of tcdB C(t) for CCNA was no greater than 80% regardless of cutoff chosen. In summary, very low C(t) values (≤25.0) could have limited value as a rapid indicator of positive toxin status by CCNA in our patient population. A broad distribution of C(t) values for toxin-negative and toxin-positive specimens precluded more robust prediction. Additional data are needed before broader application of C(t) values from qualitatively designed assays to clinical laboratory reporting. MDPI 2022-04-26 /pmc/articles/PMC9137712/ /pubmed/35625220 http://dx.doi.org/10.3390/antibiotics11050576 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Lee, Sean
Nanda, Neha
Yamaguchi, Kenichiro
Lee, Yelim
She, Rosemary C.
Clostridioides difficile Toxin B PCR Cycle Threshold as a Predictor of Toxin Testing in Stool Specimens from Hospitalized Adults
title Clostridioides difficile Toxin B PCR Cycle Threshold as a Predictor of Toxin Testing in Stool Specimens from Hospitalized Adults
title_full Clostridioides difficile Toxin B PCR Cycle Threshold as a Predictor of Toxin Testing in Stool Specimens from Hospitalized Adults
title_fullStr Clostridioides difficile Toxin B PCR Cycle Threshold as a Predictor of Toxin Testing in Stool Specimens from Hospitalized Adults
title_full_unstemmed Clostridioides difficile Toxin B PCR Cycle Threshold as a Predictor of Toxin Testing in Stool Specimens from Hospitalized Adults
title_short Clostridioides difficile Toxin B PCR Cycle Threshold as a Predictor of Toxin Testing in Stool Specimens from Hospitalized Adults
title_sort clostridioides difficile toxin b pcr cycle threshold as a predictor of toxin testing in stool specimens from hospitalized adults
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9137712/
https://www.ncbi.nlm.nih.gov/pubmed/35625220
http://dx.doi.org/10.3390/antibiotics11050576
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