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IRimage: open source software for processing images from infrared thermal cameras
IRimage aims at increasing throughput, accuracy and reproducibility of results obtained from thermal images, especially those produced with affordable, consumer-oriented cameras. IRimage processes thermal images, extracting raw data and calculating temperature values with an open and fully documente...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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PeerJ Inc.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9138121/ https://www.ncbi.nlm.nih.gov/pubmed/35634096 http://dx.doi.org/10.7717/peerj-cs.977 |
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author | Pereyra Irujo, Gustavo |
author_facet | Pereyra Irujo, Gustavo |
author_sort | Pereyra Irujo, Gustavo |
collection | PubMed |
description | IRimage aims at increasing throughput, accuracy and reproducibility of results obtained from thermal images, especially those produced with affordable, consumer-oriented cameras. IRimage processes thermal images, extracting raw data and calculating temperature values with an open and fully documented algorithm, making this data available for further processing using image analysis software. It also allows the making of reproducible measurements of the temperature of objects in a series of images, and produce visual outputs (images and videos) suitable for scientific reporting. IRimage is implemented in a scripting language of the scientific image analysis software ImageJ, allowing its use through a graphical user interface and also allowing for an easy modification or expansion of its functionality. IRimage’s results were consistent with those of standard software for 15 camera models of the most widely used brand. An example use case is also presented, in which IRimage was used to efficiently process hundreds of thermal images to reveal subtle differences in the daily pattern of leaf temperature of plants subjected to different soil water contents. IRimage’s functionalities make it better suited for research purposes than many currently available alternatives, and could contribute to making affordable consumer-grade thermal cameras useful for reproducible research. |
format | Online Article Text |
id | pubmed-9138121 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91381212022-05-28 IRimage: open source software for processing images from infrared thermal cameras Pereyra Irujo, Gustavo PeerJ Comput Sci Bioinformatics IRimage aims at increasing throughput, accuracy and reproducibility of results obtained from thermal images, especially those produced with affordable, consumer-oriented cameras. IRimage processes thermal images, extracting raw data and calculating temperature values with an open and fully documented algorithm, making this data available for further processing using image analysis software. It also allows the making of reproducible measurements of the temperature of objects in a series of images, and produce visual outputs (images and videos) suitable for scientific reporting. IRimage is implemented in a scripting language of the scientific image analysis software ImageJ, allowing its use through a graphical user interface and also allowing for an easy modification or expansion of its functionality. IRimage’s results were consistent with those of standard software for 15 camera models of the most widely used brand. An example use case is also presented, in which IRimage was used to efficiently process hundreds of thermal images to reveal subtle differences in the daily pattern of leaf temperature of plants subjected to different soil water contents. IRimage’s functionalities make it better suited for research purposes than many currently available alternatives, and could contribute to making affordable consumer-grade thermal cameras useful for reproducible research. PeerJ Inc. 2022-05-10 /pmc/articles/PMC9138121/ /pubmed/35634096 http://dx.doi.org/10.7717/peerj-cs.977 Text en ©2022 Pereyra Irujo https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ Computer Science) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics Pereyra Irujo, Gustavo IRimage: open source software for processing images from infrared thermal cameras |
title | IRimage: open source software for processing images from infrared thermal cameras |
title_full | IRimage: open source software for processing images from infrared thermal cameras |
title_fullStr | IRimage: open source software for processing images from infrared thermal cameras |
title_full_unstemmed | IRimage: open source software for processing images from infrared thermal cameras |
title_short | IRimage: open source software for processing images from infrared thermal cameras |
title_sort | irimage: open source software for processing images from infrared thermal cameras |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9138121/ https://www.ncbi.nlm.nih.gov/pubmed/35634096 http://dx.doi.org/10.7717/peerj-cs.977 |
work_keys_str_mv | AT pereyrairujogustavo irimageopensourcesoftwareforprocessingimagesfrominfraredthermalcameras |