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CGCNImp: a causal graph convolutional network for multivariate time series imputation
BACKGROUND: Multivariate time series data generally contains missing values, which can be an obstacle to subsequent analysis and may compromise downstream applications. One challenge in this endeavor is the presence of the missing values brought about by sensor failure and transmission packet loss....
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9138184/ https://www.ncbi.nlm.nih.gov/pubmed/35634128 http://dx.doi.org/10.7717/peerj-cs.966 |
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author | Liu, Caizheng Cui, Guangfan Liu, Shenghua |
author_facet | Liu, Caizheng Cui, Guangfan Liu, Shenghua |
author_sort | Liu, Caizheng |
collection | PubMed |
description | BACKGROUND: Multivariate time series data generally contains missing values, which can be an obstacle to subsequent analysis and may compromise downstream applications. One challenge in this endeavor is the presence of the missing values brought about by sensor failure and transmission packet loss. Imputation is the usual remedy in such circumstances. However, in some multivariate time series data, the complex correlation and temporal dependencies, coupled with the non-stationarity of the data, make imputation difficult. MEHODS: To address this problem, we propose a novel model for multivariate time series imputation called CGCNImp that considers both correlation and temporal dependency modeling. The correlation dependency module leverages neural Granger causality and a GCN to capture the correlation dependencies among different attributes of the time series data, while the temporal dependency module relies on an attention-driven long short term memory (LSTM) and a time lag matrix to learn its dependencies. Missing values and noise are addressed with total variation reconstruction. RESULTS: We conduct thorough empirical analyses on two real-world datasets. Imputation results show that CGCNImp achieves state-of-the-art performance when compared to previous methods. |
format | Online Article Text |
id | pubmed-9138184 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91381842022-05-28 CGCNImp: a causal graph convolutional network for multivariate time series imputation Liu, Caizheng Cui, Guangfan Liu, Shenghua PeerJ Comput Sci Algorithms and Analysis of Algorithms BACKGROUND: Multivariate time series data generally contains missing values, which can be an obstacle to subsequent analysis and may compromise downstream applications. One challenge in this endeavor is the presence of the missing values brought about by sensor failure and transmission packet loss. Imputation is the usual remedy in such circumstances. However, in some multivariate time series data, the complex correlation and temporal dependencies, coupled with the non-stationarity of the data, make imputation difficult. MEHODS: To address this problem, we propose a novel model for multivariate time series imputation called CGCNImp that considers both correlation and temporal dependency modeling. The correlation dependency module leverages neural Granger causality and a GCN to capture the correlation dependencies among different attributes of the time series data, while the temporal dependency module relies on an attention-driven long short term memory (LSTM) and a time lag matrix to learn its dependencies. Missing values and noise are addressed with total variation reconstruction. RESULTS: We conduct thorough empirical analyses on two real-world datasets. Imputation results show that CGCNImp achieves state-of-the-art performance when compared to previous methods. PeerJ Inc. 2022-04-29 /pmc/articles/PMC9138184/ /pubmed/35634128 http://dx.doi.org/10.7717/peerj-cs.966 Text en ©2022 Liu et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ Computer Science) and either DOI or URL of the article must be cited. |
spellingShingle | Algorithms and Analysis of Algorithms Liu, Caizheng Cui, Guangfan Liu, Shenghua CGCNImp: a causal graph convolutional network for multivariate time series imputation |
title | CGCNImp: a causal graph convolutional network for multivariate time series imputation |
title_full | CGCNImp: a causal graph convolutional network for multivariate time series imputation |
title_fullStr | CGCNImp: a causal graph convolutional network for multivariate time series imputation |
title_full_unstemmed | CGCNImp: a causal graph convolutional network for multivariate time series imputation |
title_short | CGCNImp: a causal graph convolutional network for multivariate time series imputation |
title_sort | cgcnimp: a causal graph convolutional network for multivariate time series imputation |
topic | Algorithms and Analysis of Algorithms |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9138184/ https://www.ncbi.nlm.nih.gov/pubmed/35634128 http://dx.doi.org/10.7717/peerj-cs.966 |
work_keys_str_mv | AT liucaizheng cgcnimpacausalgraphconvolutionalnetworkformultivariatetimeseriesimputation AT cuiguangfan cgcnimpacausalgraphconvolutionalnetworkformultivariatetimeseriesimputation AT liushenghua cgcnimpacausalgraphconvolutionalnetworkformultivariatetimeseriesimputation |