Cargando…

Randomizing of Oligopeptide Conformations by Nearest Neighbor Interactions between Amino Acid Residues

Flory’s random coil model assumes that conformational fluctuations of amino acid residues in unfolded poly(oligo)peptides and proteins are uncorrelated (isolated pair hypothesis, IPH). This implies that conformational energies, entropies and solvation free energies are all additive. Nearly 25 years...

Descripción completa

Detalles Bibliográficos
Autores principales:	Schweitzer-Stenner, Reinhard, Milorey, Bridget, Schwalbe, Harald
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9138747/ https://www.ncbi.nlm.nih.gov/pubmed/35625612 http://dx.doi.org/10.3390/biom12050684

Ejemplares similares

Local Order in the Unfolded State: Conformational Biases and Nearest Neighbor Interactions
por: Toal, Siobhan, et al.
Publicado: (2014)

Exploring Nearest Neighbor Interactions and Their Influence on the Gibbs Energy Landscape of Unfolded Proteins and Peptides
por: Schweitzer-Stenner, Reinhard
Publicado: (2022)

pH-Induced Switch between Different Modes of Cytochrome c Binding to Cardiolipin-Containing Liposomes
por: Milorey, Bridget, et al.
Publicado: (2019)

Nearest-neighbor amino acids of specificity-determining residues influence the activity of engineered Cre-type recombinases
por: Soni, Anjali, et al.
Publicado: (2020)

Approximate Nearest Neighbor Search by Residual Vector Quantization
por: Chen, Yongjian, et al.
Publicado: (2010)

Prediction of acid radical ion binding residues by K-nearest neighbors classifier
por: Liu, Liu, et al.
Publicado: (2019)

Kinetic Models for Topological Nearest-Neighbor Interactions
por: Blanchet, Adrien, et al.
Publicado: (2017)

Lectures on the nearest neighbor method
por: Biau, Gérard, et al.
Publicado: (2015)

Nearest-Neighbor Interactions and Their Influence on the Structural Aspects of Dipeptides
por: Das, Gunajyoti, et al.
Publicado: (2013)

Dimensionality reduction with unsupervised nearest neighbors
por: Kramer, Oliver
Publicado: (2013)

Accumulative Quantization for Approximate Nearest Neighbor Search
por: Ai, Liefu, et al.
Publicado: (2022)

Quasi-One-Dimensional Linarite-Type PbCu(SeO(4))(OH)(2) with Competing Nearest-Neighbor and Next-Nearest-Neighbor Intrachain Exchange Interactions
por: Markina, Maria, et al.
Publicado: (2022)

Conformal Prediction Based on K-Nearest Neighbors for Discrimination of Ginsengs by a Home-Made Electronic Nose
por: Wang, Zhan, et al.
Publicado: (2017)

Nearest-neighbor thermodynamics of deoxyinosine pairs in DNA duplexes
por: Watkins, Norman E., et al.
Publicado: (2005)

Secure Nearest Neighbor Query on Crowd-Sensing Data
por: Cheng, Ke, et al.
Publicado: (2016)

A Privacy Preserving Scheme for Nearest Neighbor Query
por: Wang, Yuhang, et al.
Publicado: (2018)

Nearest neighbor imputation algorithms: a critical evaluation
por: Beretta, Lorenzo, et al.
Publicado: (2016)

Gravity-Matching Algorithm Based on K-Nearest Neighbor
por: Gao, Shuaipeng, et al.
Publicado: (2022)

Adaptive Residual Weighted K-Nearest Neighbor Fingerprint Positioning Algorithm Based on Visible Light Communication
por: Xu, Shiwu, et al.
Publicado: (2020)

Alpha centauri: unveiling the secrets of our nearest stellar neighbor
por: Beech, Martin
Publicado: (2015)

Nearest-neighbor classifier as a tool for classification of protein families
por: Chaurasiya, Mona, et al.
Publicado: (2010)

Nearest neighbors reveal fast and slow components of motor learning
por: Kollmorgen, Sepp, et al.
Publicado: (2020)

Compressed kNN: K-Nearest Neighbors with Data Compression
por: Salvador–Meneses, Jaime, et al.
Publicado: (2019)

Predictions and analyses of RNA nearest neighbor parameters for modified nucleotides
por: Hopfinger, Melissa C, et al.
Publicado: (2020)

NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
por: Turner, Douglas H., et al.
Publicado: (2010)

Amino Acid and Oligopeptide Effects on Calcium Carbonate Solutions
por: Finney, Aaron R., et al.
Publicado: (2020)

DTI-SNNFRA: Drug-target interaction prediction by shared nearest neighbors and fuzzy-rough approximation
por: Islam, Sk Mazharul, et al.
Publicado: (2021)

Nearest Neighbor Networks: clustering expression data based on gene neighborhoods
por: Huttenhower, Curtis, et al.
Publicado: (2007)

Deep Regression of Muon Energy with a K-Nearest Neighbor Algorithm
por: Dorigo, Tommaso, et al.
Publicado: (2022)

The effects of mismatches on hybridization in DNA microarrays: determination of nearest neighbor parameters
por: Hooyberghs, J., et al.
Publicado: (2009)

Fast GPU Nearest Neighbors search algorithms for the CMS experiment at LHC
por: Degano, Alessandro
Publicado: (2018)

Using K-Nearest Neighbor Classification to Diagnose Abnormal Lung Sounds
por: Chen, Chin-Hsing, et al.
Publicado: (2015)

Distance-Constraint k-Nearest Neighbor Searching in Mobile Sensor Networks
por: Han, Yongkoo, et al.
Publicado: (2015)

The distance function effect on k-nearest neighbor classification for medical datasets
por: Hu, Li-Yu, et al.
Publicado: (2016)

Nearest Neighbor Decoding and Pilot-Aided Channel Estimation for Fading Channels †
por: Asyhari, A. Taufiq, et al.
Publicado: (2020)

Nearest-neighbor NMR spectroscopy: categorizing spectral peaks by their adjacent nuclei
por: Behera, Soumya P., et al.
Publicado: (2020)

Generating normal networks via leaf insertion and nearest neighbor interchange
por: Zhang, Louxin
Publicado: (2019)

The k conditional nearest neighbor algorithm for classification and class probability estimation
por: Gweon, Hyukjun, et al.
Publicado: (2019)

NNAN: Nearest Neighbor Attention Network to Predict Drug–Microbe Associations
por: Zhu, Bei, et al.
Publicado: (2022)

Nearest neighbor search on embeddings rapidly identifies distant protein relations
por: Schütze, Konstantin, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_22thsh7t0ra77hbnn1m11amiv1