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TRP Family Genes Are Differently Expressed and Correlated with Immune Response in Glioma

(1) Background: glioma is the most prevalent primary tumor of the human central nervous system and accompanies extremely poor prognosis in patients. The transient receptor potential (TRP) channels family consists of six different families, which are closely associated with cancer cell proliferation,...

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Autores principales: Fang, Chaoyou, Xu, Houshi, Liu, Yibo, Huang, Chenkai, Wang, Xiaoyu, Zhang, Zeyu, Xu, Yuanzhi, Yuan, Ling, Zhang, Anke, Shao, Anwen, Lou, Meiqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9139309/
https://www.ncbi.nlm.nih.gov/pubmed/35625048
http://dx.doi.org/10.3390/brainsci12050662
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author Fang, Chaoyou
Xu, Houshi
Liu, Yibo
Huang, Chenkai
Wang, Xiaoyu
Zhang, Zeyu
Xu, Yuanzhi
Yuan, Ling
Zhang, Anke
Shao, Anwen
Lou, Meiqing
author_facet Fang, Chaoyou
Xu, Houshi
Liu, Yibo
Huang, Chenkai
Wang, Xiaoyu
Zhang, Zeyu
Xu, Yuanzhi
Yuan, Ling
Zhang, Anke
Shao, Anwen
Lou, Meiqing
author_sort Fang, Chaoyou
collection PubMed
description (1) Background: glioma is the most prevalent primary tumor of the human central nervous system and accompanies extremely poor prognosis in patients. The transient receptor potential (TRP) channels family consists of six different families, which are closely associated with cancer cell proliferation, differentiation, migration, and invasion. TRP family genes play an essential role in the development of tumors. Nevertheless, the function of these genes in gliomas is not fully understood. (2) Methods: we analyze the gene expression data of 28 TRP family genes in glioma patients through bioinformatic analysis. (3) Results: the study showed the aberrations of TRP family genes were correlated to prognosis in glioma. Then, we set enrichment analysis and selected 10 hub genes that may play an important role in glioma. Meanwhile, the expression of 10 hub genes was further established according to different grades, survival time, IDH mutation status, and 1p/19q codeletion status. We found that TRPC1, TRPC3, TRPC4, TRPC5, TRPC6, MCOLN1, MCOLN2, and MCOLN3 were significantly correlated to the prognosis in glioma patients. Furthermore, we illustrated that the expression of hub genes was associated with immune activation and immunoregulators (immunoinhibitors, immunostimulators, and MHC molecules) in glioma. (4) Conclusions: we proved that TRP family genes are promising immunotherapeutic targets and potential clinical biomarkers in patients with glioma.
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spelling pubmed-91393092022-05-28 TRP Family Genes Are Differently Expressed and Correlated with Immune Response in Glioma Fang, Chaoyou Xu, Houshi Liu, Yibo Huang, Chenkai Wang, Xiaoyu Zhang, Zeyu Xu, Yuanzhi Yuan, Ling Zhang, Anke Shao, Anwen Lou, Meiqing Brain Sci Article (1) Background: glioma is the most prevalent primary tumor of the human central nervous system and accompanies extremely poor prognosis in patients. The transient receptor potential (TRP) channels family consists of six different families, which are closely associated with cancer cell proliferation, differentiation, migration, and invasion. TRP family genes play an essential role in the development of tumors. Nevertheless, the function of these genes in gliomas is not fully understood. (2) Methods: we analyze the gene expression data of 28 TRP family genes in glioma patients through bioinformatic analysis. (3) Results: the study showed the aberrations of TRP family genes were correlated to prognosis in glioma. Then, we set enrichment analysis and selected 10 hub genes that may play an important role in glioma. Meanwhile, the expression of 10 hub genes was further established according to different grades, survival time, IDH mutation status, and 1p/19q codeletion status. We found that TRPC1, TRPC3, TRPC4, TRPC5, TRPC6, MCOLN1, MCOLN2, and MCOLN3 were significantly correlated to the prognosis in glioma patients. Furthermore, we illustrated that the expression of hub genes was associated with immune activation and immunoregulators (immunoinhibitors, immunostimulators, and MHC molecules) in glioma. (4) Conclusions: we proved that TRP family genes are promising immunotherapeutic targets and potential clinical biomarkers in patients with glioma. MDPI 2022-05-19 /pmc/articles/PMC9139309/ /pubmed/35625048 http://dx.doi.org/10.3390/brainsci12050662 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Fang, Chaoyou
Xu, Houshi
Liu, Yibo
Huang, Chenkai
Wang, Xiaoyu
Zhang, Zeyu
Xu, Yuanzhi
Yuan, Ling
Zhang, Anke
Shao, Anwen
Lou, Meiqing
TRP Family Genes Are Differently Expressed and Correlated with Immune Response in Glioma
title TRP Family Genes Are Differently Expressed and Correlated with Immune Response in Glioma
title_full TRP Family Genes Are Differently Expressed and Correlated with Immune Response in Glioma
title_fullStr TRP Family Genes Are Differently Expressed and Correlated with Immune Response in Glioma
title_full_unstemmed TRP Family Genes Are Differently Expressed and Correlated with Immune Response in Glioma
title_short TRP Family Genes Are Differently Expressed and Correlated with Immune Response in Glioma
title_sort trp family genes are differently expressed and correlated with immune response in glioma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9139309/
https://www.ncbi.nlm.nih.gov/pubmed/35625048
http://dx.doi.org/10.3390/brainsci12050662
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