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Fully Automatic Whole-Volume Tumor Segmentation in Cervical Cancer
SIMPLE SUMMARY: Uterine cervical cancer (CC) is a leading cause of cancer-related deaths in women worldwide. Pelvic magnetic resonance imaging (MRI) allows the assessment of local tumor extent and guides the choice of primary treatment. MRI tumor segmentation enables whole-volume radiomic tumor prof...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9139985/ https://www.ncbi.nlm.nih.gov/pubmed/35625977 http://dx.doi.org/10.3390/cancers14102372 |
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author | Hodneland, Erlend Kaliyugarasan, Satheshkumar Wagner-Larsen, Kari Strøno Lura, Njål Andersen, Erling Bartsch, Hauke Smit, Noeska Halle, Mari Kyllesø Krakstad, Camilla Lundervold, Alexander Selvikvåg Haldorsen, Ingfrid Salvesen |
author_facet | Hodneland, Erlend Kaliyugarasan, Satheshkumar Wagner-Larsen, Kari Strøno Lura, Njål Andersen, Erling Bartsch, Hauke Smit, Noeska Halle, Mari Kyllesø Krakstad, Camilla Lundervold, Alexander Selvikvåg Haldorsen, Ingfrid Salvesen |
author_sort | Hodneland, Erlend |
collection | PubMed |
description | SIMPLE SUMMARY: Uterine cervical cancer (CC) is a leading cause of cancer-related deaths in women worldwide. Pelvic magnetic resonance imaging (MRI) allows the assessment of local tumor extent and guides the choice of primary treatment. MRI tumor segmentation enables whole-volume radiomic tumor profiling, which is potentially useful for prognostication and individualization of therapy in CC. Manual tumor segmentation is, however, labor intensive and thus not part of routine clinical workflow. In the current work, we trained a deep learning (DL) algorithm to automatically segment the primary tumor in CC patients. Although the achieved segmentation performance of the trained DL algorithm is slightly lower than that for human experts, it is still relatively good. This study suggests that automated MRI primary tumor segmentations by DL algorithms without any human interaction is possible in patients with CC. ABSTRACT: Uterine cervical cancer (CC) is the most common gynecologic malignancy worldwide. Whole-volume radiomic profiling from pelvic MRI may yield prognostic markers for tailoring treatment in CC. However, radiomic profiling relies on manual tumor segmentation which is unfeasible in the clinic. We present a fully automatic method for the 3D segmentation of primary CC lesions using state-of-the-art deep learning (DL) techniques. In 131 CC patients, the primary tumor was manually segmented on T2-weighted MRI by two radiologists (R1, R2). Patients were separated into a train/validation (n = 105) and a test- (n = 26) cohort. The segmentation performance of the DL algorithm compared with R1/R2 was assessed with Dice coefficients (DSCs) and Hausdorff distances (HDs) in the test cohort. The trained DL network retrieved whole-volume tumor segmentations yielding median DSCs of 0.60 and 0.58 for DL compared with R1 (DL-R1) and R2 (DL-R2), respectively, whereas DSC for R1-R2 was 0.78. Agreement for primary tumor volumes was excellent between raters (R1-R2: intraclass correlation coefficient (ICC) = 0.93), but lower for the DL algorithm and the raters (DL-R1: ICC = 0.43; DL-R2: ICC = 0.44). The developed DL algorithm enables the automated estimation of tumor size and primary CC tumor segmentation. However, segmentation agreement between raters is better than that between DL algorithm and raters. |
format | Online Article Text |
id | pubmed-9139985 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-91399852022-05-28 Fully Automatic Whole-Volume Tumor Segmentation in Cervical Cancer Hodneland, Erlend Kaliyugarasan, Satheshkumar Wagner-Larsen, Kari Strøno Lura, Njål Andersen, Erling Bartsch, Hauke Smit, Noeska Halle, Mari Kyllesø Krakstad, Camilla Lundervold, Alexander Selvikvåg Haldorsen, Ingfrid Salvesen Cancers (Basel) Article SIMPLE SUMMARY: Uterine cervical cancer (CC) is a leading cause of cancer-related deaths in women worldwide. Pelvic magnetic resonance imaging (MRI) allows the assessment of local tumor extent and guides the choice of primary treatment. MRI tumor segmentation enables whole-volume radiomic tumor profiling, which is potentially useful for prognostication and individualization of therapy in CC. Manual tumor segmentation is, however, labor intensive and thus not part of routine clinical workflow. In the current work, we trained a deep learning (DL) algorithm to automatically segment the primary tumor in CC patients. Although the achieved segmentation performance of the trained DL algorithm is slightly lower than that for human experts, it is still relatively good. This study suggests that automated MRI primary tumor segmentations by DL algorithms without any human interaction is possible in patients with CC. ABSTRACT: Uterine cervical cancer (CC) is the most common gynecologic malignancy worldwide. Whole-volume radiomic profiling from pelvic MRI may yield prognostic markers for tailoring treatment in CC. However, radiomic profiling relies on manual tumor segmentation which is unfeasible in the clinic. We present a fully automatic method for the 3D segmentation of primary CC lesions using state-of-the-art deep learning (DL) techniques. In 131 CC patients, the primary tumor was manually segmented on T2-weighted MRI by two radiologists (R1, R2). Patients were separated into a train/validation (n = 105) and a test- (n = 26) cohort. The segmentation performance of the DL algorithm compared with R1/R2 was assessed with Dice coefficients (DSCs) and Hausdorff distances (HDs) in the test cohort. The trained DL network retrieved whole-volume tumor segmentations yielding median DSCs of 0.60 and 0.58 for DL compared with R1 (DL-R1) and R2 (DL-R2), respectively, whereas DSC for R1-R2 was 0.78. Agreement for primary tumor volumes was excellent between raters (R1-R2: intraclass correlation coefficient (ICC) = 0.93), but lower for the DL algorithm and the raters (DL-R1: ICC = 0.43; DL-R2: ICC = 0.44). The developed DL algorithm enables the automated estimation of tumor size and primary CC tumor segmentation. However, segmentation agreement between raters is better than that between DL algorithm and raters. MDPI 2022-05-11 /pmc/articles/PMC9139985/ /pubmed/35625977 http://dx.doi.org/10.3390/cancers14102372 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Hodneland, Erlend Kaliyugarasan, Satheshkumar Wagner-Larsen, Kari Strøno Lura, Njål Andersen, Erling Bartsch, Hauke Smit, Noeska Halle, Mari Kyllesø Krakstad, Camilla Lundervold, Alexander Selvikvåg Haldorsen, Ingfrid Salvesen Fully Automatic Whole-Volume Tumor Segmentation in Cervical Cancer |
title | Fully Automatic Whole-Volume Tumor Segmentation in Cervical Cancer |
title_full | Fully Automatic Whole-Volume Tumor Segmentation in Cervical Cancer |
title_fullStr | Fully Automatic Whole-Volume Tumor Segmentation in Cervical Cancer |
title_full_unstemmed | Fully Automatic Whole-Volume Tumor Segmentation in Cervical Cancer |
title_short | Fully Automatic Whole-Volume Tumor Segmentation in Cervical Cancer |
title_sort | fully automatic whole-volume tumor segmentation in cervical cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9139985/ https://www.ncbi.nlm.nih.gov/pubmed/35625977 http://dx.doi.org/10.3390/cancers14102372 |
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