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Optimal Population Coding for Dynamic Input by Nonequilibrium Networks

The efficient coding hypothesis states that neural response should maximize its information about the external input. Theoretical studies focus on optimal response in single neuron and population code in networks with weak pairwise interactions. However, more biological settings with asymmetric conn...

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Autor principal: Chen, Kevin S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9140425/
https://www.ncbi.nlm.nih.gov/pubmed/35626482
http://dx.doi.org/10.3390/e24050598
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author Chen, Kevin S.
author_facet Chen, Kevin S.
author_sort Chen, Kevin S.
collection PubMed
description The efficient coding hypothesis states that neural response should maximize its information about the external input. Theoretical studies focus on optimal response in single neuron and population code in networks with weak pairwise interactions. However, more biological settings with asymmetric connectivity and the encoding for dynamical stimuli have not been well-characterized. Here, we study the collective response in a kinetic Ising model that encodes the dynamic input. We apply gradient-based method and mean-field approximation to reconstruct networks given the neural code that encodes dynamic input patterns. We measure network asymmetry, decoding performance, and entropy production from networks that generate optimal population code. We analyze how stimulus correlation, time scale, and reliability of the network affect optimal encoding networks. Specifically, we find network dynamics altered by statistics of the dynamic input, identify stimulus encoding strategies, and show optimal effective temperature in the asymmetric networks. We further discuss how this approach connects to the Bayesian framework and continuous recurrent neural networks. Together, these results bridge concepts of nonequilibrium physics with the analyses of dynamics and coding in networks.
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spelling pubmed-91404252022-05-28 Optimal Population Coding for Dynamic Input by Nonequilibrium Networks Chen, Kevin S. Entropy (Basel) Article The efficient coding hypothesis states that neural response should maximize its information about the external input. Theoretical studies focus on optimal response in single neuron and population code in networks with weak pairwise interactions. However, more biological settings with asymmetric connectivity and the encoding for dynamical stimuli have not been well-characterized. Here, we study the collective response in a kinetic Ising model that encodes the dynamic input. We apply gradient-based method and mean-field approximation to reconstruct networks given the neural code that encodes dynamic input patterns. We measure network asymmetry, decoding performance, and entropy production from networks that generate optimal population code. We analyze how stimulus correlation, time scale, and reliability of the network affect optimal encoding networks. Specifically, we find network dynamics altered by statistics of the dynamic input, identify stimulus encoding strategies, and show optimal effective temperature in the asymmetric networks. We further discuss how this approach connects to the Bayesian framework and continuous recurrent neural networks. Together, these results bridge concepts of nonequilibrium physics with the analyses of dynamics and coding in networks. MDPI 2022-04-25 /pmc/articles/PMC9140425/ /pubmed/35626482 http://dx.doi.org/10.3390/e24050598 Text en © 2022 by the author. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Chen, Kevin S.
Optimal Population Coding for Dynamic Input by Nonequilibrium Networks
title Optimal Population Coding for Dynamic Input by Nonequilibrium Networks
title_full Optimal Population Coding for Dynamic Input by Nonequilibrium Networks
title_fullStr Optimal Population Coding for Dynamic Input by Nonequilibrium Networks
title_full_unstemmed Optimal Population Coding for Dynamic Input by Nonequilibrium Networks
title_short Optimal Population Coding for Dynamic Input by Nonequilibrium Networks
title_sort optimal population coding for dynamic input by nonequilibrium networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9140425/
https://www.ncbi.nlm.nih.gov/pubmed/35626482
http://dx.doi.org/10.3390/e24050598
work_keys_str_mv AT chenkevins optimalpopulationcodingfordynamicinputbynonequilibriumnetworks