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A Study of the Genomic Variations Associated with Autistic Spectrum Disorders in a Russian Cohort of Patients Using Whole-Exome Sequencing

This study provides new data on the whole-exome sequencing of a cohort of children with autistic spectrum disorders (ASD) from an underexplored Russian population. Using both a cross-sectional approach involving a control cohort of the same ancestry and an annotation-based approach involving relevan...

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Autores principales: Gibitova, Ekaterina A., Dobrynin, Pavel V., Pomerantseva, Ekaterina A., Musatova, Elizaveta V., Kostareva, Anna, Evsyukov, Igor, Rychkov, Sergey Y., Zhukova, Olga V., Naumova, Oxana Y., Grigorenko, Elena L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9141003/
https://www.ncbi.nlm.nih.gov/pubmed/35627305
http://dx.doi.org/10.3390/genes13050920
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author Gibitova, Ekaterina A.
Dobrynin, Pavel V.
Pomerantseva, Ekaterina A.
Musatova, Elizaveta V.
Kostareva, Anna
Evsyukov, Igor
Rychkov, Sergey Y.
Zhukova, Olga V.
Naumova, Oxana Y.
Grigorenko, Elena L.
author_facet Gibitova, Ekaterina A.
Dobrynin, Pavel V.
Pomerantseva, Ekaterina A.
Musatova, Elizaveta V.
Kostareva, Anna
Evsyukov, Igor
Rychkov, Sergey Y.
Zhukova, Olga V.
Naumova, Oxana Y.
Grigorenko, Elena L.
author_sort Gibitova, Ekaterina A.
collection PubMed
description This study provides new data on the whole-exome sequencing of a cohort of children with autistic spectrum disorders (ASD) from an underexplored Russian population. Using both a cross-sectional approach involving a control cohort of the same ancestry and an annotation-based approach involving relevant public databases, we explored exonic single nucleotide variants and copy-number variation potentially involved in the manifestation of ASD. The study results reveal new potential ASD candidate-variants found in the studied Russian cohort and show a high prevalence of common ASD-associated genomic variants, especially those in the genes known to be associated with the manifestation of intellectual disabilities. Our screening of an ASD cohort from a previously understudied population allowed us to flag at least a few novel genes (IGLJ2, FAM21A, OR11H12, HIP1, PRAMEF10, and ZNF717) regarding their potential involvement in ASD.
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spelling pubmed-91410032022-05-28 A Study of the Genomic Variations Associated with Autistic Spectrum Disorders in a Russian Cohort of Patients Using Whole-Exome Sequencing Gibitova, Ekaterina A. Dobrynin, Pavel V. Pomerantseva, Ekaterina A. Musatova, Elizaveta V. Kostareva, Anna Evsyukov, Igor Rychkov, Sergey Y. Zhukova, Olga V. Naumova, Oxana Y. Grigorenko, Elena L. Genes (Basel) Article This study provides new data on the whole-exome sequencing of a cohort of children with autistic spectrum disorders (ASD) from an underexplored Russian population. Using both a cross-sectional approach involving a control cohort of the same ancestry and an annotation-based approach involving relevant public databases, we explored exonic single nucleotide variants and copy-number variation potentially involved in the manifestation of ASD. The study results reveal new potential ASD candidate-variants found in the studied Russian cohort and show a high prevalence of common ASD-associated genomic variants, especially those in the genes known to be associated with the manifestation of intellectual disabilities. Our screening of an ASD cohort from a previously understudied population allowed us to flag at least a few novel genes (IGLJ2, FAM21A, OR11H12, HIP1, PRAMEF10, and ZNF717) regarding their potential involvement in ASD. MDPI 2022-05-20 /pmc/articles/PMC9141003/ /pubmed/35627305 http://dx.doi.org/10.3390/genes13050920 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Gibitova, Ekaterina A.
Dobrynin, Pavel V.
Pomerantseva, Ekaterina A.
Musatova, Elizaveta V.
Kostareva, Anna
Evsyukov, Igor
Rychkov, Sergey Y.
Zhukova, Olga V.
Naumova, Oxana Y.
Grigorenko, Elena L.
A Study of the Genomic Variations Associated with Autistic Spectrum Disorders in a Russian Cohort of Patients Using Whole-Exome Sequencing
title A Study of the Genomic Variations Associated with Autistic Spectrum Disorders in a Russian Cohort of Patients Using Whole-Exome Sequencing
title_full A Study of the Genomic Variations Associated with Autistic Spectrum Disorders in a Russian Cohort of Patients Using Whole-Exome Sequencing
title_fullStr A Study of the Genomic Variations Associated with Autistic Spectrum Disorders in a Russian Cohort of Patients Using Whole-Exome Sequencing
title_full_unstemmed A Study of the Genomic Variations Associated with Autistic Spectrum Disorders in a Russian Cohort of Patients Using Whole-Exome Sequencing
title_short A Study of the Genomic Variations Associated with Autistic Spectrum Disorders in a Russian Cohort of Patients Using Whole-Exome Sequencing
title_sort study of the genomic variations associated with autistic spectrum disorders in a russian cohort of patients using whole-exome sequencing
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9141003/
https://www.ncbi.nlm.nih.gov/pubmed/35627305
http://dx.doi.org/10.3390/genes13050920
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