Cargando…

Development of a Deep Learning Model for Malignant Small Bowel Tumors Survival: A SEER-Based Study

Background This study aims to explore a deep learning (DL) algorithm for developing a prognostic model and perform survival analyses in SBT patients. Methods The demographic and clinical features of patients with SBTs were extracted from the Surveillance, Epidemiology and End Results (SEER) database...

Descripción completa

Detalles Bibliográficos
Autores principales: Yin, Minyue, Lin, Jiaxi, Liu, Lu, Gao, Jingwen, Xu, Wei, Yu, Chenyan, Qu, Shuting, Liu, Xiaolin, Qian, Lijuan, Xu, Chunfang, Zhu, Jinzhou
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9141623/
https://www.ncbi.nlm.nih.gov/pubmed/35626403
http://dx.doi.org/10.3390/diagnostics12051247
_version_ 1784715389851140096
author Yin, Minyue
Lin, Jiaxi
Liu, Lu
Gao, Jingwen
Xu, Wei
Yu, Chenyan
Qu, Shuting
Liu, Xiaolin
Qian, Lijuan
Xu, Chunfang
Zhu, Jinzhou
author_facet Yin, Minyue
Lin, Jiaxi
Liu, Lu
Gao, Jingwen
Xu, Wei
Yu, Chenyan
Qu, Shuting
Liu, Xiaolin
Qian, Lijuan
Xu, Chunfang
Zhu, Jinzhou
author_sort Yin, Minyue
collection PubMed
description Background This study aims to explore a deep learning (DL) algorithm for developing a prognostic model and perform survival analyses in SBT patients. Methods The demographic and clinical features of patients with SBTs were extracted from the Surveillance, Epidemiology and End Results (SEER) database. We randomly split the samples into the training set and the validation set at 7:3. Cox proportional hazards (Cox-PH) analysis and the DeepSurv algorithm were used to develop models. The performance of the Cox-PH and DeepSurv models was evaluated using receiver operating characteristic curves, calibration curves, C-statistics and decision-curve analysis (DCA). A Kaplan–Meier (K–M) survival analysis was performed for further explanation on prognostic effect of the Cox-PH model. Results The multivariate analysis demonstrated that seven variables were associated with cancer-specific survival (CSS) (all p < 0.05). The DeepSurv model showed better performance than the Cox-PH model (C-index: 0.871 vs. 0.866). The calibration curves and DCA revealed that the two models had good discrimination and calibration. Moreover, patients with ileac malignancy and N2 stage disease were not responding to surgery according to the K–M analysis. Conclusions This study reported a DeepSurv model that performed well in CSS in SBT patients. It might offer insights into future research to explore more DL algorithms in cohort studies.
format Online
Article
Text
id pubmed-9141623
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-91416232022-05-28 Development of a Deep Learning Model for Malignant Small Bowel Tumors Survival: A SEER-Based Study Yin, Minyue Lin, Jiaxi Liu, Lu Gao, Jingwen Xu, Wei Yu, Chenyan Qu, Shuting Liu, Xiaolin Qian, Lijuan Xu, Chunfang Zhu, Jinzhou Diagnostics (Basel) Article Background This study aims to explore a deep learning (DL) algorithm for developing a prognostic model and perform survival analyses in SBT patients. Methods The demographic and clinical features of patients with SBTs were extracted from the Surveillance, Epidemiology and End Results (SEER) database. We randomly split the samples into the training set and the validation set at 7:3. Cox proportional hazards (Cox-PH) analysis and the DeepSurv algorithm were used to develop models. The performance of the Cox-PH and DeepSurv models was evaluated using receiver operating characteristic curves, calibration curves, C-statistics and decision-curve analysis (DCA). A Kaplan–Meier (K–M) survival analysis was performed for further explanation on prognostic effect of the Cox-PH model. Results The multivariate analysis demonstrated that seven variables were associated with cancer-specific survival (CSS) (all p < 0.05). The DeepSurv model showed better performance than the Cox-PH model (C-index: 0.871 vs. 0.866). The calibration curves and DCA revealed that the two models had good discrimination and calibration. Moreover, patients with ileac malignancy and N2 stage disease were not responding to surgery according to the K–M analysis. Conclusions This study reported a DeepSurv model that performed well in CSS in SBT patients. It might offer insights into future research to explore more DL algorithms in cohort studies. MDPI 2022-05-17 /pmc/articles/PMC9141623/ /pubmed/35626403 http://dx.doi.org/10.3390/diagnostics12051247 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Yin, Minyue
Lin, Jiaxi
Liu, Lu
Gao, Jingwen
Xu, Wei
Yu, Chenyan
Qu, Shuting
Liu, Xiaolin
Qian, Lijuan
Xu, Chunfang
Zhu, Jinzhou
Development of a Deep Learning Model for Malignant Small Bowel Tumors Survival: A SEER-Based Study
title Development of a Deep Learning Model for Malignant Small Bowel Tumors Survival: A SEER-Based Study
title_full Development of a Deep Learning Model for Malignant Small Bowel Tumors Survival: A SEER-Based Study
title_fullStr Development of a Deep Learning Model for Malignant Small Bowel Tumors Survival: A SEER-Based Study
title_full_unstemmed Development of a Deep Learning Model for Malignant Small Bowel Tumors Survival: A SEER-Based Study
title_short Development of a Deep Learning Model for Malignant Small Bowel Tumors Survival: A SEER-Based Study
title_sort development of a deep learning model for malignant small bowel tumors survival: a seer-based study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9141623/
https://www.ncbi.nlm.nih.gov/pubmed/35626403
http://dx.doi.org/10.3390/diagnostics12051247
work_keys_str_mv AT yinminyue developmentofadeeplearningmodelformalignantsmallboweltumorssurvivalaseerbasedstudy
AT linjiaxi developmentofadeeplearningmodelformalignantsmallboweltumorssurvivalaseerbasedstudy
AT liulu developmentofadeeplearningmodelformalignantsmallboweltumorssurvivalaseerbasedstudy
AT gaojingwen developmentofadeeplearningmodelformalignantsmallboweltumorssurvivalaseerbasedstudy
AT xuwei developmentofadeeplearningmodelformalignantsmallboweltumorssurvivalaseerbasedstudy
AT yuchenyan developmentofadeeplearningmodelformalignantsmallboweltumorssurvivalaseerbasedstudy
AT qushuting developmentofadeeplearningmodelformalignantsmallboweltumorssurvivalaseerbasedstudy
AT liuxiaolin developmentofadeeplearningmodelformalignantsmallboweltumorssurvivalaseerbasedstudy
AT qianlijuan developmentofadeeplearningmodelformalignantsmallboweltumorssurvivalaseerbasedstudy
AT xuchunfang developmentofadeeplearningmodelformalignantsmallboweltumorssurvivalaseerbasedstudy
AT zhujinzhou developmentofadeeplearningmodelformalignantsmallboweltumorssurvivalaseerbasedstudy