Cargando…

Multivariate Gaussian Copula Mutual Information to Estimate Functional Connectivity with Less Random Architecture

Recognition of a brain region’s interaction is an important field in neuroscience. Most studies use the Pearson correlation to find the interaction between the regions. According to the experimental evidence, there is a nonlinear dependence between the activities of different brain regions that is i...

Descripción completa

Detalles Bibliográficos
Autores principales: Ashrafi, Mahnaz, Soltanian-Zadeh, Hamid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9141633/
https://www.ncbi.nlm.nih.gov/pubmed/35626516
http://dx.doi.org/10.3390/e24050631
_version_ 1784715391363186688
author Ashrafi, Mahnaz
Soltanian-Zadeh, Hamid
author_facet Ashrafi, Mahnaz
Soltanian-Zadeh, Hamid
author_sort Ashrafi, Mahnaz
collection PubMed
description Recognition of a brain region’s interaction is an important field in neuroscience. Most studies use the Pearson correlation to find the interaction between the regions. According to the experimental evidence, there is a nonlinear dependence between the activities of different brain regions that is ignored by Pearson correlation as a linear measure. Typically, the average activity of each region is used as input because it is a univariate measure. This dimensional reduction, i.e., averaging, leads to a loss of spatial information across voxels within the region. In this study, we propose using an information-theoretic measure, multivariate mutual information (mvMI), as a nonlinear dependence to find the interaction between regions. This measure, which has been recently proposed, simplifies the mutual information calculation complexity using the Gaussian copula. Using simulated data, we show that the using this measure overcomes the mentioned limitations. Additionally using the real resting-state fMRI data, we compare the level of significance and randomness of graphs constructed using different methods. Our results indicate that the proposed method estimates the functional connectivity more significantly and leads to a smaller number of random connections than the common measure, Pearson correlation. Moreover, we find that the similarity of the estimated functional networks of the individuals is higher when the proposed method is used.
format Online
Article
Text
id pubmed-9141633
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-91416332022-05-28 Multivariate Gaussian Copula Mutual Information to Estimate Functional Connectivity with Less Random Architecture Ashrafi, Mahnaz Soltanian-Zadeh, Hamid Entropy (Basel) Article Recognition of a brain region’s interaction is an important field in neuroscience. Most studies use the Pearson correlation to find the interaction between the regions. According to the experimental evidence, there is a nonlinear dependence between the activities of different brain regions that is ignored by Pearson correlation as a linear measure. Typically, the average activity of each region is used as input because it is a univariate measure. This dimensional reduction, i.e., averaging, leads to a loss of spatial information across voxels within the region. In this study, we propose using an information-theoretic measure, multivariate mutual information (mvMI), as a nonlinear dependence to find the interaction between regions. This measure, which has been recently proposed, simplifies the mutual information calculation complexity using the Gaussian copula. Using simulated data, we show that the using this measure overcomes the mentioned limitations. Additionally using the real resting-state fMRI data, we compare the level of significance and randomness of graphs constructed using different methods. Our results indicate that the proposed method estimates the functional connectivity more significantly and leads to a smaller number of random connections than the common measure, Pearson correlation. Moreover, we find that the similarity of the estimated functional networks of the individuals is higher when the proposed method is used. MDPI 2022-04-29 /pmc/articles/PMC9141633/ /pubmed/35626516 http://dx.doi.org/10.3390/e24050631 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ashrafi, Mahnaz
Soltanian-Zadeh, Hamid
Multivariate Gaussian Copula Mutual Information to Estimate Functional Connectivity with Less Random Architecture
title Multivariate Gaussian Copula Mutual Information to Estimate Functional Connectivity with Less Random Architecture
title_full Multivariate Gaussian Copula Mutual Information to Estimate Functional Connectivity with Less Random Architecture
title_fullStr Multivariate Gaussian Copula Mutual Information to Estimate Functional Connectivity with Less Random Architecture
title_full_unstemmed Multivariate Gaussian Copula Mutual Information to Estimate Functional Connectivity with Less Random Architecture
title_short Multivariate Gaussian Copula Mutual Information to Estimate Functional Connectivity with Less Random Architecture
title_sort multivariate gaussian copula mutual information to estimate functional connectivity with less random architecture
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9141633/
https://www.ncbi.nlm.nih.gov/pubmed/35626516
http://dx.doi.org/10.3390/e24050631
work_keys_str_mv AT ashrafimahnaz multivariategaussiancopulamutualinformationtoestimatefunctionalconnectivitywithlessrandomarchitecture
AT soltanianzadehhamid multivariategaussiancopulamutualinformationtoestimatefunctionalconnectivitywithlessrandomarchitecture